RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 KDM1AO60341 852 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 ZNF189O75820 626 aaPredicted RBP17.98■□□□□ 0.47
NME3-204ENST00000563498 RBP3P10745 1247 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 MMP11P24347 488 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 NSG1P42857 185 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 PLOD1Q02809 727 aaPredicted RBP17.98■□□□□ 0.47
NME3-204ENST00000563498 CACNG1Q06432 222 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 SLC9A5Q14940 896 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 KIR2DS3Q14952 304 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 C1QL3Q5VWW1 255 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 IGFL2Q6UWQ7 119 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 TMTC1Q8IUR5 882 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 OR5K2Q8NHB8 316 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 DENND1AQ8TEH3 1009 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 KRT35Q92764 455 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 FKBP10Q96AY3 582 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 WDR54Q9H977 334 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 NUP210LQ5VU65 1888 aa17.98■□□□□ 0.47
NME3-204ENST00000563498 MASP2O00187 686 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 AP2A1O95782 977 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 ONECUT2O95948 504 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 FTH1P02794 183 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 CTSBP07858 339 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 TPBGLP0DKB5 382 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 ITGA3P26006 1051 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 PTPN7P35236 360 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 MAGEA1P43355 309 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 GCGRP47871 477 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 PER3P56645 1201 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 EIF3EP60228 445 aaKnown RBP17.97■□□□□ 0.47
NME3-204ENST00000563498 ITIH4Q14624 930 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 DBN1Q16643 649 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 PRAMEF13Q5VWM6 474 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 PACS1Q6VY07 963 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 KCNMB4Q86W47 210 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 CNGA4Q8IV77 575 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 PIANPQ8IYJ0 282 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 CCDC110Q8TBZ0 833 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 DLG3Q92796 817 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 CDKN2AIPNLQ96HQ2 116 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 SLC22A11Q9NSA0 550 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 IRAK4Q9NWZ3 460 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 NOVA2Q9UNW9 492 aaKnown RBP17.97■□□□□ 0.47
NME3-204ENST00000563498 CCDC88CQ9P219 2028 aa17.97■□□□□ 0.47
NME3-204ENST00000563498 MACROD2A1Z1Q3 448 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 PJA2O43164 708 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 ALBP02768 609 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 PRSS56P0CW18 603 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 CTNNA2P26232 953 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 TNFRSF8P28908 595 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 TSFMP43897 325 aaKnown RBP17.96■□□□□ 0.47
NME3-204ENST00000563498 ARSFP54793 590 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 FOXL2P58012 376 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 SPARCL1Q14515 664 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 AGAP7PQ5VUJ5 663 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 B3GNTL1Q67FW5 361 aaPredicted RBP17.96■□□□□ 0.47
NME3-204ENST00000563498 KCTD11Q693B1 232 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 DARS2Q6PI48 645 aaKnown RBP17.96■□□□□ 0.47
NME3-204ENST00000563498 STYXQ8WUJ0 223 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 ELMO1Q92556 727 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 AGAP4Q96P64 663 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 SLC26A1Q9H2B4 701 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 SLC6A20Q9NP91 592 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 EURLQ9NYK6 297 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 SMARCAL1Q9NZC9 954 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 FBXL4Q9UKA2 621 aa17.96■□□□□ 0.47
NME3-204ENST00000563498 TDRKHQ9Y2W6 561 aaKnown RBP17.96■□□□□ 0.47
NME3-204ENST00000563498 A0A1B0GX78 115 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 SLC5A10A0PJK1 596 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 ISM1B1AKI9 464 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 BHMG1C9JSJ3 638 aaPredicted RBP17.95■□□□□ 0.46
NME3-204ENST00000563498 E2F3O00716 465 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 PIM1P11309 404 aaPredicted RBP17.95■□□□□ 0.46
NME3-204ENST00000563498 EDN3P14138 238 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 PSMA3P25788 255 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 PEBP1P30086 187 aaKnown RBP17.95■□□□□ 0.46
NME3-204ENST00000563498 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
NME3-204ENST00000563498 IRAK1BP1Q5VVH5 260 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 OVCH1Q7RTY7 1134 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 TMEM151BQ8IW70 566 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 OSBPL8Q9BZF1 889 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 MRM3Q9HC36 420 aaKnown RBP17.95■□□□□ 0.46
NME3-204ENST00000563498 ENAMQ9NRM1 1142 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 CSAG2Q9Y5P2 127 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 ANKRD12Q6UB98 2062 aa17.95■□□□□ 0.46
NME3-204ENST00000563498 SOCS6O14544 535 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 LRRTM2O43300 516 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 ITGAXP20702 1163 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 ALAS2P22557 587 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 HIF1AQ16665 826 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 SYTL3Q4VX76 610 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 YOD1Q5VVQ6 348 aaPredicted RBP17.94■□□□□ 0.46
NME3-204ENST00000563498 DNAJB14Q8TBM8 379 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 GRHL3Q8TE85 626 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 FAR1Q8WVX9 515 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 SPSB2Q99619 263 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 LRRC40Q9H9A6 602 aa17.94■□□□□ 0.46
NME3-204ENST00000563498 LUC7LQ9NQ29 371 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms