RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 WDR26Q9H7D7 661 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 UBE2ZQ9H832 354 aaPredicted RBP12.57□□□□□ -0.4
SNX1-211ENST00000560829 WDR41Q9HAD4 459 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 SLC52A3Q9NQ40 469 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 KLQ9UEF7 1012 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 TMEM98Q9Y2Y6 226 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 PCYT1BQ9Y5K3 369 aaPredicted RBP12.57□□□□□ -0.4
SNX1-211ENST00000560829 TICRRQ7Z2Z1 1910 aa12.57□□□□□ -0.4
SNX1-211ENST00000560829 A0A1W2PQU0 124 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 KRT87PA6NCN2 255 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 NPIPB8E9PQR5 432 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 PAK4O96013 591 aaPredicted RBP12.56□□□□□ -0.4
SNX1-211ENST00000560829 BDKRB1P46663 353 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 ZNF33BQ06732 778 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 RPS6KA2Q15349 733 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 NR6A1Q15406 480 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 BLOC1S3Q6QNY0 202 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 CRTC3Q6UUV7 619 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 BNC2Q6ZN30 1099 aaPredicted RBP12.56□□□□□ -0.4
SNX1-211ENST00000560829 RIPOR1Q6ZS17 1223 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 AMZ2Q86W34 360 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 HORMAD1Q86X24 394 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 FNDC5Q8NAU1 212 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 OR14C36Q8NHC7 312 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 GANCQ8TET4 914 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 FOXJ1Q92949 421 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 SIPA1Q96FS4 1042 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
SNX1-211ENST00000560829 SERPINI1Q99574 410 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 C1QTNF7Q9BXJ2 289 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 SLC17A9Q9BYT1 436 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 ATG10Q9H0Y0 220 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 SLC6A17Q9H1V8 727 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 OR52A5Q9H2C5 316 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 INTS7Q9NVH2 962 aaKnown RBP12.56□□□□□ -0.4
SNX1-211ENST00000560829 ASIC5Q9NY37 505 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 PIKFYVEQ9Y2I7 2098 aa12.56□□□□□ -0.4
SNX1-211ENST00000560829 PRAMEF4O60810 478 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 RNGTTO60942 597 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 SLC16A8O95907 504 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 MYCLP1P12525 358 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 ITPKAP23677 461 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 ZFP36L2P47974 494 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 SGCGQ13326 291 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 CCINQ13939 588 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 RCAN2Q14206 197 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 E2F2Q14209 437 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 NFE2L1Q14494 772 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 AP5B1Q2VPB7 878 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 EOGTQ5NDL2 527 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 IER5LQ5T953 404 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 LIPJQ5W064 366 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 FAM83HQ6ZRV2 1179 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 THOC6Q86W42 341 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 ROPN1LQ96C74 230 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 ZDHHC5Q9C0B5 715 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PHPT1Q9NRX4 125 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 ZNF490Q9ULM2 529 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 SNX6Q9UNH7 406 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 NDUFAF1Q9Y375 327 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 TNRC18O15417 2968 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 MRASO14807 208 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 FFAR3O14843 346 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 KMOO15229 486 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 GPR42O15529 346 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 JUPP14923 745 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 CAPN3P20807 821 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PRPH2P23942 346 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 DPP6P42658 865 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 DMPKQ09013 629 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 MAD2L1Q13257 205 aaPredicted RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 NAE1Q13564 534 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 CPSF6Q16630 551 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX1-211ENST00000560829 MMEL1Q495T6 779 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PIGGQ5H8A4 983 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PDZD3Q86UT5 571 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 HPS6Q86YV9 775 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PCYOX1LQ8NBM8 494 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 HBEGFQ99075 208 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 RMI1Q9H9A7 625 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 ITM2CQ9NQX7 267 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 SLC2A4RGQ9NR83 387 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 FARSBQ9NSD9 589 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 GPRC5BQ9NZH0 403 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
SNX1-211ENST00000560829 SLC23A2Q9UGH3 650 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 POMPQ9Y244 141 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 NCKAP1Q9Y2A7 1128 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
SNX1-211ENST00000560829 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 DYTNA2CJ06 578 aa12.54□□□□□ -0.4
SNX1-211ENST00000560829 SLC22A3O75751 556 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms