RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 AGXTP21549 392 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 NMBRP28336 390 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 PEBP1P30086 187 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 OTX2P32243 289 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 CXCR5P32302 372 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 GABRA4P48169 554 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 PGDP52209 483 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 BASP1P80723 227 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 NCF4Q15080 339 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 DNAJC21Q5F1R6 531 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 PTRHD1Q6GMV3 140 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 CES3Q6UWW8 571 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 SLC22A15Q8IZD6 547 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 DNAJC22Q8N4W6 341 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 ZNF655Q8N720 491 aaPredicted RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 ADAMTS17Q8TE56 1095 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 UBE2Q2Q8WVN8 375 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 ASZ1Q8WWH4 475 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 SGSM3Q96HU1 749 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 CARD6Q9BX69 1037 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 TSSK1BQ9BXA7 367 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 DHCR7Q9UBM7 475 aaKnown RBP9.86□□□□□ -0.83
LDLR-214ENST00000560628 BSNQ9UPA5 3926 aa9.86□□□□□ -0.83
LDLR-214ENST00000560628 TCRBV7S3A2A0A539 114 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 TTLL8A6PVC2 850 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 GOLGA8KD6RF30 607 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 H3BMH7 237 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 GOLGA8TH3BQL2 631 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 PRMT5O14744 637 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 NDUFS3O75489 264 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 VAPBO95292 243 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 CCDC175P0C221 793 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 MGAT1P26572 445 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 AOAHP28039 575 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 PKLRP30613 574 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 GRIA3P42263 894 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 NPY2RP49146 381 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 TTPAP49638 278 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 FOXL2P58012 376 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 RAPSNQ13702 412 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 ATP1A4Q13733 1029 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 UBAP2LQ14157 1087 aaKnown RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 SLC9A5Q14940 896 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 KIR2DS3Q14952 304 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 TRIP13Q15645 432 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 KYNUQ16719 465 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 SLC5A12Q1EHB4 618 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 NADK2Q4G0N4 442 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 AARS2Q5JTZ9 985 aaKnown RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 ZNF385CQ66K41 422 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 MCATQ8IVS2 390 aaKnown RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 TMEM151BQ8IW70 566 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 OTUD6BQ8N6M0 293 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 LINC01555Q8NAE3 123 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 FDCSPQ8NFU4 85 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 SKA2Q8WVK7 121 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 MFRPQ9BY79 579 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 EIF2B3Q9NR50 452 aaKnown RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 TREX1Q9NSU2 369 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 BFARQ9NZS9 450 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 GPN3Q9UHW5 284 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 SLC39A10Q9ULF5 831 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 TTC7AQ9ULT0 858 aaPredicted RBP9.85□□□□□ -0.83
LDLR-214ENST00000560628 PLCL2Q9UPR0 1127 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 AP1M2Q9Y6Q5 423 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 NBASA2RRP1 2371 aa9.85□□□□□ -0.83
LDLR-214ENST00000560628 KRT87PA6NCN2 255 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 ZSCAN9O15535 394 aaPredicted RBP9.84□□□□□ -0.83
LDLR-214ENST00000560628 KDM1AO60341 852 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 KLF7O75840 302 aaPredicted RBP9.84□□□□□ -0.83
LDLR-214ENST00000560628 SLCO2B1O94956 709 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 RPN2P04844 631 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 MAGP20916 626 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 CD9P21926 228 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 ALAS2P22557 587 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 FMO4P31512 558 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 VPS41P49754 854 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 RAB28P51157 221 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 EIF3BP55884 814 aaKnown RBP9.84□□□□□ -0.83
LDLR-214ENST00000560628 DCDP81605 110 aaKnown RBP9.84□□□□□ -0.83
LDLR-214ENST00000560628 GRB7Q14451 532 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 TMED2Q15363 201 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 SF1Q15637 639 aaKnown RBP9.84□□□□□ -0.83
LDLR-214ENST00000560628 CCSMST1Q4G0I0 132 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 TLDC1Q6P9B6 456 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 C4orf22Q6V702 233 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 LRRC8AQ8IWT6 810 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 MAIP1Q8WWC4 291 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 PEX13Q92968 403 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 MIB2Q96AX9 1013 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 FAM136AQ96C01 138 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 MFSD3Q96ES6 412 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 GBP5Q96PP8 586 aa9.84□□□□□ -0.83
LDLR-214ENST00000560628 DPH2Q9BQC3 489 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms