RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MT-ND3P03897 115 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 NTRK1P04629 796 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ERVK-10P10266 1014 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 DLSTP36957 453 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 BDKRB1P46663 353 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 RAB28P51157 221 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ADARP55265 1226 aaKnown RBP12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ARL4CP56559 192 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ABHD18Q0P651 414 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 CRYMQ14894 314 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 TTLL9Q3SXZ7 439 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 MSS51Q4VC12 460 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPANXN3Q5MJ09 141 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 MAGEC3Q8TD91 643 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 RAD51AP1Q96B01 352 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLC22A18Q96BI1 424 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 PWWP2AQ96N64 755 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 OR2A14Q96R47 310 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 EFHD1Q9BUP0 239 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPHK1Q9NYA1 384 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 SERTAD3Q9UJW9 196 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 FBXO5Q9UKT4 447 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 LOC400499M0QZD8 3231 aa12.55□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 A0A0J9YY10 115 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 NDC80O14777 642 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CPNE3O75131 537 aaKnown RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 KATNA1O75449 491 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 HAUS5O94927 633 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SEC31AO94979 1220 aaKnown RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 TPBGLP0DKB5 382 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 PRKAR1AP10644 381 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 WT1P19544 449 aaPredicted RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CYP2A7P20853 494 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CD9P21926 228 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 IVDP26440 423 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 PKLRP30613 574 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CCNFP41002 786 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 ELK3P41970 407 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 STAT5AP42229 794 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 MPP1Q00013 466 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 C2orf54Q08AI8 447 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CUL1Q13616 776 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 KIR2DS3Q14952 304 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 KLHL38Q2WGJ6 581 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SOWAHCQ53LP3 525 aaPredicted RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 ANKMY2Q8IV38 441 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 GPR135Q8IZ08 494 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 C19orf47Q8N9M1 422 aaKnown RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 OR8K5Q8NH50 307 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SNRNP27Q8WVK2 155 aaKnown RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SLC39A7Q92504 469 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZNF501Q96CX3 271 aaPredicted RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 FCRL4Q96PJ5 515 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 PITPNM3Q9BZ71 974 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 GALPQ9UBC7 116 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 PADI1Q9ULC6 663 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 SNX24Q9Y343 169 aa12.54□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZNF891A8MT65 544 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 VPS26AO75436 327 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 C1orf105O95561 183 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 TCN2P20062 427 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 PDIA2Q13087 525 aaKnown RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 TSTA3Q13630 321 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 MAP7Q14244 749 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 SF1Q15637 639 aaKnown RBP12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 KYNUQ16719 465 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 DEFB110Q30KQ9 67 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 C16orf46Q6P387 395 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 CDHR3Q6ZTQ4 885 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 BBOF1Q8ND07 529 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 STARD8Q92502 1023 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 ZNF592Q92610 1267 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 KCNJ9Q92806 393 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 EXTL1Q92935 676 aa12.53□□□□□ -0.4
CTDSPL2-209ENST00000560620 CERS2Q96G23 380 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms