RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 HABP4Q5JVS0 413 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LDLRAP1Q5SW96 308 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LRIF1Q5T3J3 769 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CWF19L1Q69YN2 538 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 GLYATQ6IB77 296 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DPPA4Q7L190 304 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 EPHX4Q8IUS5 362 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RIMKLAQ8IXN7 391 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RGL4Q8IZJ4 473 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LIX1Q8N485 282 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CBR4Q8N4T8 237 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DCBLD1Q8N8Z6 715 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ZNF548Q8NEK5 533 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TSPAN14Q8NG11 270 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 OR2A12Q8NGT7 310 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ZFP28Q8NHY6 868 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ATL1Q8WXF7 558 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 GTF2H4Q92759 462 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 GLMNQ92990 594 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TRIM43Q96BQ3 446 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TESCQ96BS2 214 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RMND5BQ96G75 393 aaPredicted RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 VPS35Q96QK1 796 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 PRPF18Q99633 342 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ZSCAN5AQ9BUG6 496 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ADI1Q9BV57 179 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 UGT2B28Q9BY64 529 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RBM38Q9H0Z9 239 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 KCNH6Q9H252 994 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 FAM83DQ9H4H8 585 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RPF2Q9H7B2 306 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 CLK4Q9HAZ1 481 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 DNAJC11Q9NVH1 559 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 ARL15Q9NXU5 204 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
SMAD3-212ENST00000559937 FBXO10Q9UK96 956 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 TMPRSS11EQ9UL52 423 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 MAPRE3Q9UPY8 281 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 RWDD3Q9Y3V2 267 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 NEUROG3Q9Y4Z2 214 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 INSL6Q9Y581 213 aa7.9□□□□□ -1.14
SMAD3-212ENST00000559937 LAMA2P24043 3122 aaKnown RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 A0A096LPI6 279 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 RNF103-CHMP3A0A140T963 221 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 SAC3D1A6NKF1 404 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 C16orf96A6NNT2 1141 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 H0YAE9 185 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 DLGAP1O14490 977 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 NRG2O14511 850 aaPredicted RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 FFAR3O14843 346 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 ACOX3O15254 700 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 GPR42O15529 346 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 XYLBO75191 536 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 SLCO2B1O94956 709 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 BMP10O95393 424 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 PGM3O95394 542 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 HPRP00739 348 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 PGRP06401 933 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 RETP07949 1114 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 GSTM1P09488 218 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 MTHFD1P11586 935 aaKnown RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 BCKDHAP12694 445 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 TYRP14679 529 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 EPORP19235 508 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 ITGB8P26012 769 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 CAPGP40121 348 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 CASP2P42575 452 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 GDF5P43026 501 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 ALDH3B2P48448 385 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 NRIP1P48552 1158 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 PNLIPRP1P54315 467 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 C21orf58P58505 322 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 RPS14P62263 151 aaKnown RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 GSTM4Q03013 218 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 CHRNB3Q05901 458 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 MERTKQ12866 999 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 EPS8Q12929 822 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 PPIGQ13427 754 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■■□□ 15.8
SMAD3-212ENST00000559937 TEAD2Q15562 447 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 FAM174BQ3ZCQ3 159 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 SLC36A3Q495N2 470 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 NADK2Q4G0N4 442 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 RUNDC3AQ59EK9 446 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 PRSS36Q5K4E3 855 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 HENMT1Q5T8I9 393 aaKnown RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 LIPJQ5W064 366 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 IYDQ6PHW0 289 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 Q6ZVU0 165 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 ADIPOR2Q86V24 386 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 SATL1Q86VE3 508 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 IFNEQ86WN2 208 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 MICU2Q8IYU8 434 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 NRSN1Q8IZ57 195 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 DHRSXQ8N5I4 330 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 MRPL43Q8N983 215 aaKnown RBP7.89□□□□□ -1.15
SMAD3-212ENST00000559937 CHST14Q8NCH0 376 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 CSGALNACT1Q8TDX6 532 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 ADAMTS16Q8TE57 1224 aa7.89□□□□□ -1.15
SMAD3-212ENST00000559937 FRS2Q8WU20 508 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms