RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 AP1S3Q96PC3 154 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 E9PCH4 1651 aa13.72□□□□□ -0.21
SPG11-210ENST00000558319 H3BNH8 94 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 LAMP2P13473 410 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
SPG11-210ENST00000558319 ABCA11PQ4W5N1 156 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 LRRC70Q7Z2Q7 622 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 SVOPLQ8N434 492 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 WACQ9BTA9 647 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 IPPKQ9H8X2 491 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CLDND1Q9NY35 253 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 HSPB11Q9Y547 144 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 MADDQ8WXG6 1647 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 OR51F1A6NGY5 319 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 GCATO75600 419 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 UQCRC1P31930 480 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 MATKP42679 507 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 MTA1Q13330 715 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 GRK1Q15835 563 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 TPRG1LQ5T0D9 272 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 SH3PXD2AQ5TCZ1 1133 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CAPN13Q6MZZ7 669 aaPredicted RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 OR2L8Q8NGY9 312 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 OR5AK3PQ8NH89 298 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 IDI2Q9BXS1 227 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 TRAV6A0A075B6T7 132 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 PLGP00747 810 aaPredicted RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 CREB5Q02930 508 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CLCQ05315 142 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 GTF2H2Q13888 395 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 GTF2H2CQ6P1K8 395 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 PHF13Q86YI8 300 aaPredicted RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 SNX29P2Q8IUI4 249 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 LCN9Q8WX39 176 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 JPH3Q8WXH2 748 aaPredicted RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 RFKQ969G6 155 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 L7N2F9 121 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 TSPAN1O60635 241 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CKMT2P17540 419 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 VAMP2P63027 116 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 SGCBQ16585 318 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 AGAP2Q99490 1192 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 AIF1LQ9BQI0 150 aa13.71□□□□□ -0.21
SPG11-210ENST00000558319 CCDC86Q9H6F5 360 aaKnown RBP13.71□□□□□ -0.21
SPG11-210ENST00000558319 DISP2A7MBM2 1401 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 A0A1W2PRU2 124 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 TRIM64A6NGJ6 449 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 LRRC10BA6NIK2 292 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 DDX6P26196 483 aaKnown RBP eCLIP13.71□□□□□ -0.22
SPG11-210ENST00000558319 ACSL1P33121 698 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 CCL14Q16627 93 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 XKR5Q6UX68 686 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 PEX5LQ8IYB4 626 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 DCSTAMPQ9H295 470 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 PCDH18Q9HCL0 1135 aa13.71□□□□□ -0.22
SPG11-210ENST00000558319 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.22
SPG11-210ENST00000558319 HMGB3O15347 200 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 PDPK1O15530 556 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 MPZL2O60487 215 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OR4F21O95013 312 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OAZ2O95190 189 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 RPL10P27635 214 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 LARS2Q15031 903 aaKnown RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 ENPP7Q6UWV6 458 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 OR4C6Q8NH72 309 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 C12orf66Q96MD2 445 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 SLC33A1O00400 549 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 PUM1Q14671 1186 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPG11-210ENST00000558319 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TOMM5Q8N4H5 51 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 DAPL1A0PJW8 107 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 PITPNM1O00562 1244 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 TRAPPC6AO75865 159 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 ANXA4P09525 319 aaPredicted RBP13.7□□□□□ -0.22
SPG11-210ENST00000558319 SP2Q02086 613 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 GBE1Q04446 702 aa13.7□□□□□ -0.22
SPG11-210ENST00000558319 LAPTM5Q13571 262 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms