RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 IL17BQ9UHF5 180 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 POLG2Q9UHN1 485 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 CHMP2BQ9UQN3 213 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
SNX6-203ENST00000555416 ATRXP46100 2492 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 C2orf74A8MZ97 194 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 MATN2O00339 956 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 RAD51CO43502 376 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 C1orf105O95561 183 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 CTSBP07858 339 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 CHRM3P20309 590 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 ARL4DP49703 201 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 PGGT1BP53609 377 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 CUL1Q13616 776 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX6-203ENST00000555416 SPESP1Q6UW49 350 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 UNC5DQ6UXZ4 953 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 TAX1BP1Q86VP1 789 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 PPP1R3BQ86XI6 285 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 ANKMY2Q8IV38 441 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 RASGRP3Q8IV61 690 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 NLGN4XQ8N0W4 816 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 ZBTB2Q8N680 514 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 NLGN4YQ8NFZ3 816 aaPredicted RBP13.22□□□□□ -0.29
SNX6-203ENST00000555416 DENND1AQ8TEH3 1009 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 TTC9Q92623 222 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 SNF8Q96H20 258 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 LATS2Q9NRM7 1088 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 TEX264Q9Y6I9 313 aa13.22□□□□□ -0.29
SNX6-203ENST00000555416 H3BMM5 538 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 KPNA5O15131 536 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 MATN4O95460 622 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 NTRK1P04629 796 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 STAT5AP42229 794 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 GABRA4P48169 554 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 TUBB4BP68371 445 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 ACY1Q03154 408 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 TUBB2AQ13885 445 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 TRADDQ15628 312 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 SPANXN3Q5MJ09 141 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 C6orf15Q6UXA7 325 aaPredicted RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 CDHR3Q6ZTQ4 885 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 CARFQ8N187 725 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 SLC38A9Q8NBW4 561 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 C2CD4AQ8NCU7 369 aaPredicted RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 OR1L3Q8NH93 324 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 SKA2Q8WVK7 121 aaPredicted RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 NDNQ99608 321 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 DPH5Q9H2P9 285 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 PDE7BQ9NP56 450 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 OR6C2Q9NZP2 312 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 RARRES3Q9UL19 164 aa13.21□□□□□ -0.29
SNX6-203ENST00000555416 MRPS18BQ9Y676 258 aaKnown RBP13.21□□□□□ -0.29
SNX6-203ENST00000555416 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.3
SNX6-203ENST00000555416 ARHGEF33A8MVX0 844 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 ISM1B1AKI9 464 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 HAX1O00165 279 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 TERTO14746 1132 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 PRICKLE3O43900 615 aaPredicted RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 PRB1P04280 392 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 CD9P21926 228 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 RAB28P51157 221 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 HIF1AQ16665 826 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 TEDDM1Q5T9Z0 273 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 DUPD1Q68J44 220 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 LCN10Q6JVE6 187 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 C19orf47Q8N9M1 422 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 CD200R1Q8TD46 325 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 CALML6Q8TD86 181 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 CERS2Q96G23 380 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 GPR21Q99679 349 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 ZC3H7BQ9UGR2 993 aaKnown RBP13.2□□□□□ -0.3
SNX6-203ENST00000555416 KALRNO60229 2985 aa13.2□□□□□ -0.3
SNX6-203ENST00000555416 A0A1W2PPV9 198 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms