RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 ASTN2O75129 1339 aaPredicted RBP4.97□□□□□ -1.61
FOXN3-206ENST00000554005 UBR3Q6ZT12 1888 aa4.96□□□□□ -1.61
FOXN3-206ENST00000554005 H0YIN7 160 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 TULP2O00295 520 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 EIF3DO15371 548 aaKnown RBP eCLIP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 LETM1O95202 739 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 FGF3P11487 239 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 MYL6BP14649 208 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 CCKARP32238 428 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 CRKLP46109 303 aaKnown RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 FUT6P51993 359 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 SNRPEP62304 92 aaKnown RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 COASYQ13057 564 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 IL11RAQ14626 422 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 MELKQ14680 651 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 FAM109BQ6ICB4 259 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 TMEM211Q6ICI0 200 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 UNQ6126/PRO20091Q6UXV3 157 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 GET4Q7L5D6 327 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 PLPPR4Q7Z2D5 763 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 FBXO39Q8N4B4 442 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 CCDC191Q8NCU4 936 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 LMO3Q8TAP4 145 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 WDR20Q8TBZ3 569 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 TAS1R2Q8TE23 839 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 SORCS1Q8WY21 1168 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 PTERQ96BW5 349 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 FAM84BQ96KN1 310 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-206ENST00000554005 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 CCDC106Q9BWC9 280 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 TCP11L1Q9NUJ3 509 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 GDE1Q9NZC3 331 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 C4AP0C0L4 1744 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 ATP10DQ9P241 1426 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 ZNF541Q9H0D2 1346 aa4.96□□□□□ -1.62
FOXN3-206ENST00000554005 ADCY9O60503 1353 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 CACNA1FO60840 1977 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 C5orf60A6NFR6 353 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 ANKRD66B4E2M5 251 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 ERVV-1B6SEH8 477 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 BUD23O43709 281 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 PSMD10O75832 226 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 GJA1P17302 382 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 EEF1A1P68104 462 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 UBXN2AP68543 259 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 EEF1A2Q05639 463 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 AIMP1Q12904 312 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 SNTB1Q13884 538 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 C9orf152Q5JTZ5 239 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 STXBP5Q5T5C0 1151 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 C20orf194Q5TEA3 1177 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 EEF1A1P5Q5VTE0 462 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 TUBA1AQ71U36 451 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 MEPCEQ7L2J0 689 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 COPS6Q7L5N1 327 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 GBGT1Q8N5D6 347 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 PI4KAP1Q8N8J0 262 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 RBM15BQ8NDT2 890 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 ERLEC1Q96DZ1 483 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 FAM210AQ96ND0 272 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 ZNF582Q96NG8 517 aaPredicted RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 NEK1Q96PY6 1258 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 TUBA1CQ9BQE3 449 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 SLA2Q9H6Q3 261 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 RRAGDQ9NQL2 400 aaPredicted RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 MBNL1Q9NR56 388 aaKnown RBP4.95□□□□□ -1.62
FOXN3-206ENST00000554005 DDX19BQ9UMR2 479 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 TNNQ9UQP3 1299 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 ZNF711Q9Y462 761 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 MAP3K15Q6ZN16 1313 aa4.95□□□□□ -1.62
FOXN3-206ENST00000554005 PRAC2D3DTV9 90 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 TO15178 435 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 PRAMEF11O60813 436 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 BMP10O95393 424 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 SNRNP70P08621 437 aaKnown RBP4.94□□□□□ -1.62
FOXN3-206ENST00000554005 GM2AP17900 193 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 MATR3P43243 847 aaKnown RBP eCLIP4.94□□□□□ -1.628e-7■■■□□ 18
FOXN3-206ENST00000554005 ARCN1P48444 511 aaKnown RBP4.94□□□□□ -1.62
FOXN3-206ENST00000554005 PPP5CP53041 499 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 CDH13P55290 713 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 TROAPQ12815 778 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 PRPF4BQ13523 1007 aaKnown RBP4.94□□□□□ -1.62
FOXN3-206ENST00000554005 ASIC2Q16515 512 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 KYNUQ16719 465 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 BEND3Q5T5X7 828 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 C1QTNF12Q5T7M4 302 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 IRAK1BP1Q5VVH5 260 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 FAM171BQ6P995 826 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 KIF6Q6ZMV9 814 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 PLEKHM3Q6ZWE6 761 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 DEFB132Q7Z7B7 95 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 MUC20Q8N307 709 aaPredicted RBP4.94□□□□□ -1.62
FOXN3-206ENST00000554005 OR10S1Q8NGN2 331 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 SPATA20Q8TB22 786 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 SECTM1Q8WVN6 248 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 PGAP3Q96FM1 320 aaPredicted RBP4.94□□□□□ -1.62
FOXN3-206ENST00000554005 C16orf70Q9BSU1 422 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 POU2F3Q9UKI9 436 aa4.94□□□□□ -1.62
FOXN3-206ENST00000554005 YIPF1Q9Y548 306 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms