RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ANAPC5Q9UJX4 755 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 ZNF749O43361 778 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 NDUFS3O75489 264 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 CBSLP0DN79 551 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 MAGP20916 626 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 SHMT2P34897 504 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 CBSP35520 551 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 GRIA3P42263 894 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 FASTKQ14296 549 aaKnown RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF385CQ66K41 422 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF449Q6P9G9 518 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF517Q6ZMY9 492 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 ENDOVQ8N8Q3 282 aaKnown RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 GIMAP7Q8NHV1 300 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 DENND1AQ8TEH3 1009 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 CLIP3Q96DZ5 547 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 PBKQ96KB5 322 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 FCRL4Q96PJ5 515 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 SYNPO2LQ9H987 977 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 ACTR5Q9H9F9 607 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 FBXO6Q9NRD1 293 aaPredicted RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 DHCR7Q9UBM7 475 aaKnown RBP17.58■□□□□ 0.4
SHMT2-206ENST00000553529 TP53TG5Q9Y2B4 290 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 MED16Q9Y2X0 877 aa17.58■□□□□ 0.4
SHMT2-206ENST00000553529 A0A0J9YY10 115 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 ZCWPW2A0A1B0GU75 182 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 J3QKU1 62 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 MEN1O00255 615 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 PGRMC1O00264 195 aaKnown RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 QSOX1O00391 747 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 KIF5CO60282 957 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 PHF2O75151 1096 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 CNOT3O75175 753 aaKnown RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 SLCO2B1O94956 709 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 GSTM1P09488 218 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 CYP2A7P20853 494 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 MCM3P25205 808 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 TTPAP49638 278 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 PGGT1BP53609 377 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 MPP1Q00013 466 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 GSTM4Q03013 218 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 CTBP1Q13363 440 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 KYNUQ16719 465 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 TYSND1Q2T9J0 566 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 ACSBG2Q5FVE4 666 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 FCRL6Q6DN72 434 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF549Q6P9A3 640 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 SYTL1Q8IYJ3 562 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 NAT8LQ8N9F0 302 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 SKA2Q8WVK7 121 aaPredicted RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 PEX13Q92968 403 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 CAPZA3Q96KX2 299 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 FAM117AQ9C073 453 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 MRM3Q9HC36 420 aaKnown RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 STOX2Q9P2F5 926 aaPredicted RBP17.57■□□□□ 0.4
SHMT2-206ENST00000553529 GNPTGQ9UJJ9 305 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 SNX12Q9UMY4 172 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 PCDHGA6Q9Y5G7 932 aa17.57■□□□□ 0.4
SHMT2-206ENST00000553529 CCDC88CQ9P219 2028 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 SUV39H1O43463 412 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 C1orf105O95561 183 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 APOA4P06727 396 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 RPS3P23396 243 aaKnown RBP eCLIP17.56■□□□□ 0.46e-7■■□□□ 13.4
SHMT2-206ENST00000553529 PTPN4P29074 926 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 CUL1Q13616 776 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 DHX34Q14147 1143 aaKnown RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 ANKRD20A4Q4UJ75 823 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 MSS51Q4VC12 460 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 AARS2Q5JTZ9 985 aaKnown RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 HP1BP3Q5SSJ5 553 aaPredicted RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 KIAA0930Q6ICG6 404 aaPredicted RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF655Q8N720 491 aaPredicted RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 APOBEC4Q8WW27 367 aaKnown RBP17.56■□□□□ 0.4
SHMT2-206ENST00000553529 ASZ1Q8WWH4 475 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 TTC1Q99614 292 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 EFHD1Q9BUP0 239 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 PCDHB3Q9Y5E6 796 aa17.56■□□□□ 0.4
SHMT2-206ENST00000553529 ARGFXA6NJG6 315 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 MATN2O00339 956 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 MED26O95402 600 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 S1PR4O95977 384 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 ITGAXP20702 1163 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 CD9P21926 228 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 PTGIRP43119 386 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 MAGEA3P43357 314 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 RAB28P51157 221 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 ITGA1P56199 1179 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 MRPS25P82663 173 aaKnown RBP17.55■□□□□ 0.4
SHMT2-206ENST00000553529 DNAJC21Q5F1R6 531 aaKnown RBP17.55■□□□□ 0.4
SHMT2-206ENST00000553529 ZNF470Q6ECI4 717 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 C4orf22Q6V702 233 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 CILP2Q8IUL8 1156 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 IGDCC3Q8IVU1 814 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 DCUN1D3Q8IWE4 304 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 CARFQ8N187 725 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 DNAJC22Q8N4W6 341 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 C9orf43Q8TAL5 461 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms