RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 PATE1Q8WXA2 126 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 JPH3Q8WXH2 748 aaPredicted RBP8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 NELL1Q92832 810 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 PYCR2Q96C36 320 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 CXorf40BQ96DE9 158 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 THOC1Q96FV9 657 aaKnown RBP8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 SLCO1B3Q9NPD5 702 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 SEMA4BQ9NPR2 832 aaPredicted RBP8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 SPASTQ9UBP0 616 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 RAB23Q9ULC3 237 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 ANGPTL3Q9Y5C1 460 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 LAMA1P25391 3075 aa8.5□□□□□ -1.05
AC055716.2-201ENST00000552545 AQP9O43315 295 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ITM2AO43736 263 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SERPINE1P05121 402 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 KITP10721 976 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 HERVK_113P63132 956 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 BNIP3Q12983 259 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 RBBP7Q16576 425 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 DEFB133Q30KQ1 61 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ZNF678Q5SXM1 525 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 CES4AQ5XG92 561 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 UNC5DQ6UXZ4 953 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 GKN2Q86XP6 184 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SFTPA2Q8IWL1 248 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SYTL1Q8IYJ3 562 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 LRRC34Q8IZ02 419 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 OR5K2Q8NHB8 316 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ATP6V1E2Q96A05 226 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 RAD51AP1Q96B01 352 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 RHBDF1Q96CC6 855 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 CCDC138Q96M89 665 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 IL17FQ96PD4 163 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 NRTNQ99748 197 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ERVK-6Q9BXR3 956 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 PITPNM3Q9BZ71 974 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SMOC1Q9H4F8 434 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 RDH14Q9HBH5 336 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 TMCO1Q9UM00 188 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 FIS1Q9Y3D6 152 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ASB1Q9Y576 335 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 TAPBPO15533 448 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 H2AFYO75367 372 aaKnown RBP8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SLC16A8O95907 504 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 F3P13726 295 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 GRK2P25098 689 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 PPM1FP49593 454 aaPredicted RBP8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 AP1S2P56377 157 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ABCE1P61221 599 aaKnown RBP8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 DUOXA1Q1HG43 343 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 UNC50Q53HI1 259 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 TRIM61Q5EBN2 209 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 CPLX4Q7Z7G2 160 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 DCUN1D3Q8IWE4 304 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 TBC1D21Q8IYX1 336 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 SNX31Q8N9S9 440 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 OR9A1PQ8NGU1 263 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 TRPC4APQ8TEL6 797 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ZDHHC1Q8WTX9 485 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 CHMP6Q96FZ7 201 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 C20orf27Q9GZN8 174 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 ARRDC1-AS1Q9H2J1 176 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 XKR8Q9H6D3 395 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 FGFR1OP2Q9NVK5 253 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 UCKL1Q9NWZ5 548 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 MARCOQ9UEW3 520 aaPredicted RBP8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 GMEB2Q9UKD1 530 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 COLEC10Q9Y6Z7 277 aa8.49□□□□□ -1.05
AC055716.2-201ENST00000552545 CACNA1EQ15878 2313 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 CABIN1Q9Y6J0 2220 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 GMNCA6NCL1 334 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 YY2O15391 372 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 STK16O75716 305 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 WDR47O94967 919 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 VIPP01282 170 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 CHRNGP07510 517 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 ANXA6P08133 673 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 MTHFD1P11586 935 aaKnown RBP8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 CTSKP43235 329 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 ARRB1P49407 418 aaPredicted RBP8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 DNAJB13P59910 316 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 IRX1P78414 480 aaPredicted RBP8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 NFKB2Q00653 900 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 BNC1Q01954 994 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 NAE1Q13564 534 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 PLCL1Q15111 1095 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 PTCHD3Q3KNS1 767 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 TUBB8Q3ZCM7 444 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 THEMIS2Q5TEJ8 643 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 AGTRAPQ6RW13 159 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 ABRAXAS1Q6UWZ7 409 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 TEX9Q8N6V9 391 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 PDPRQ8NCN5 879 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 ZNF548Q8NEK5 533 aaPredicted RBP8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 SH3KBP1Q96B97 665 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 CAMK1GQ96NX5 476 aa8.48□□□□□ -1.05
AC055716.2-201ENST00000552545 SPOCK3Q9BQ16 436 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms