RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 HNF4AP41235 474 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 HALP42357 657 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 IRF8Q02556 426 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 CREB5Q02930 508 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 CAPRIN1Q14444 709 aaKnown RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 GRIN2CQ14957 1233 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 MTX3Q5HYI7 312 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 C6orf10Q5SRN2 563 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 C9orf50Q5SZB4 431 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 RAET1GQ6H3X3 334 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 RNF111Q6ZNA4 994 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 VRK3Q8IV63 474 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 RGL4Q8IZJ4 473 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 LIX1Q8N485 282 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 OR8J3Q8NGG0 315 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 STARD8Q92502 1023 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 POP5Q969H6 163 aaKnown RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 VPS33AQ96AX1 596 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 METTL2AQ96IZ6 378 aaKnown RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 ZFYVE19Q96K21 471 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 SLC39A3Q9BRY0 314 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 TMEM245Q9H330 911 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 RMND5AQ9H871 391 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 HPS4Q9NQG7 708 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 C8orf4Q9NR00 106 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 THAP10Q9P2Z0 257 aaPredicted RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 MAGEL2Q9UJ55 1249 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 RAB26Q9ULW5 256 aa13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
TMEM106C-209ENST00000548640 KCNE1BA0A087WTH5 132 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 C17orf113A0A1B0GUU1 675 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 C9JVG2 144 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 INPP4BO15327 924 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 MYO1DO94832 1006 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 C6P13671 934 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 GRIA2P42262 883 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 GSK3BP49841 420 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 LIPEQ05469 1076 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FCHO2Q0JRZ9 810 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 ABRQ12979 859 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 CHIT1Q13231 466 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 SHHQ15465 462 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 LRRC36Q1X8D7 754 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 RFTN2Q52LD8 501 aaPredicted RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 SFT2D3Q587I9 215 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 C10orf62Q5T681 223 aaPredicted RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FAM219BQ5XKK7 198 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FAM109BQ6ICB4 259 aaPredicted RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 MSANTD1Q6ZTZ1 278 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 PTRH1Q86Y79 214 aaKnown RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 HM13Q8TCT9 377 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 SLC13A3Q8WWT9 602 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 REPS1Q96D71 796 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FRG2BQ96QU4 278 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 FAM129BQ96TA1 746 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 PKP2Q99959 881 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 OSBPL6Q9BZF3 934 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 NKX2-4Q9H2Z4 354 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 ALG2Q9H553 416 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 ITM2BQ9Y287 266 aa13.64□□□□□ -0.23
TMEM106C-209ENST00000548640 DHRS12A0PJE2 317 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ASPDHA6ND91 283 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ZNF839A8K0R7 811 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ARHGEF33A8MVX0 844 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 TXNDC9O14530 226 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ANKRD28O15084 1053 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ARPC2O15144 300 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 PRMT3O60678 531 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 PDYNP01213 254 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 EPHX1P07099 455 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 FCARP24071 287 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 IL12AP29459 219 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 GRIA3P42263 894 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 CTSCP53634 463 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 AQP4P55087 323 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 HMGCS1Q01581 520 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 PCDH1Q08174 1060 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 MAPKAPK3Q16644 382 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 PAGE3Q5JUK9 113 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 TANGO2Q6ICL3 276 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
TMEM106C-209ENST00000548640 ANKRD54Q6NXT1 300 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms