RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CFAP61Q8NHU2 1237 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 PROKR1Q8TCW9 393 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 FOPNLQ96NB1 174 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 SLC25A23Q9BV35 468 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 RAB11FIP5Q9BXF6 653 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 ING2Q9H160 280 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 MRM3Q9HC36 420 aaKnown RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 TREX1Q9NSU2 369 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 TXLNGQ9NUQ3 528 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 IRAK4Q9NWZ3 460 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 SPHK1Q9NYA1 384 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 GPN3Q9UHW5 284 aaPredicted RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 GNPTGQ9UJJ9 305 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
YBX3-218ENST00000546298 ZFC3H1O60293 1989 aaKnown RBP9.04□□□□□ -0.96
YBX3-218ENST00000546298 BPTFQ12830 3046 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 ARGFXA6NJG6 315 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 H3BMM5 538 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 ZSCAN9O15535 394 aaPredicted RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 KLHL41O60662 606 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 TMEM63AO94886 807 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 TPBGLP0DKB5 382 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 PAMP19021 973 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 TPSB2P20231 275 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 CD9P21926 228 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 AOAHP28039 575 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 PGDP52209 483 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 DCDP81605 110 aaKnown RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 FOXK1P85037 733 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 IL10RAQ13651 578 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 SEMA3AQ14563 771 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 NCF4Q15080 339 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 TPSAB1Q15661 275 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 ZIC1Q15915 447 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 PTCHD3Q3KNS1 767 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 ZC3H12BQ5HYM0 836 aaKnown RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 RNF187Q5TA31 235 aaPredicted RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 LCN10Q6JVE6 187 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 RHBDD2Q6NTF9 364 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 LRRC8BQ6P9F7 803 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 FAM198BQ6UWH4 519 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 MED25Q71SY5 747 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 OTOAQ7RTW8 1153 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 LDB1Q86U70 411 aaPredicted RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 ATCAYQ86WG3 371 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 HPS6Q86YV9 775 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 DNAJC22Q8N4W6 341 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 OR2L8Q8NGY9 312 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 MAGEC3Q8TD91 643 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 SKA2Q8WVK7 121 aaPredicted RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 DLG3Q92796 817 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 RAD51AP1Q96B01 352 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 TCF12Q99081 682 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 NRTNQ99748 197 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 NDC1Q9BTX1 674 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 KIFC1Q9BW19 673 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 FAM60AQ9NP50 221 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 PLAGL1Q9UM63 463 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
YBX3-218ENST00000546298 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
YBX3-218ENST00000546298 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 MAGEB16A2A368 324 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 IQCF5A8MTL0 148 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PEX12O00623 359 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 RASGRF2O14827 1237 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 DNAJB5O75953 348 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 VAPBO95292 243 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 CAPN1P07384 714 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 MGAT1P26572 445 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 NMBRP28336 390 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 CCNFP41002 786 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 FOLR3P41439 243 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PTGIRP43119 386 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 KCNJ1P48048 391 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 GABRA4P48169 554 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 ARSFP54793 590 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 EIF3BP55884 814 aaKnown RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 SSPNQ14714 243 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 YOD1Q5VVQ6 348 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 MLIPQ5VWP3 458 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PAPD7Q5XG87 772 aaKnown RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 ZNF385CQ66K41 422 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 VRK3Q8IV63 474 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 KRT222Q8N1A0 295 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 ZNF655Q8N720 491 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 FLVCR1-AS1Q8TAF5 88 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 LKAAEAR1Q8TD35 194 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 ADAMTS17Q8TE56 1095 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 ZUFSPQ96AP4 578 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PBKQ96KB5 322 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 FER1L6-AS2Q96M78 137 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 NAP1L3Q99457 506 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 TRIM55Q9BYV6 548 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 SPRTNQ9H040 489 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 P2RY12Q9H244 342 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 MLXIPLQ9NP71 852 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms