RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 PPP1R3BQ86XI6 285 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 NLGN4XQ8N0W4 816 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 ESX1Q8N693 406 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 C2CD4AQ8NCU7 369 aaPredicted RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 NLGN4YQ8NFZ3 816 aaPredicted RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 OR8K5Q8NH50 307 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 FLVCR1-AS1Q8TAF5 88 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 RAD51AP1Q96B01 352 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 CERS2Q96G23 380 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 PWWP2AQ96N64 755 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TUBB2BQ9BVA1 445 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 KRTAP3-2Q9BYR7 98 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 FBXO6Q9NRD1 293 aaPredicted RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 FGF21Q9NSA1 209 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 WHRNQ9P202 907 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 ZC3H7BQ9UGR2 993 aaKnown RBP11.49□□□□□ -0.57
YBX3-217ENST00000546164 RARRES3Q9UL19 164 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 KALRNO60229 2985 aa11.49□□□□□ -0.57
YBX3-217ENST00000546164 E5RI56 91 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 RASGRF2O14827 1237 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 RAD51CO43502 376 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SPAG6O75602 509 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 HAUS5O94927 633 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 C1orf105O95561 183 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ERVK-10P10266 1014 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ST6GAL1P15907 406 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 UGT2B7P16662 529 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ZNF28P17035 718 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CD9P21926 228 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ELK3P41970 407 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 MPP1Q00013 466 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 C2orf54Q08AI8 447 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ABHD18Q0P651 414 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SRSF6Q13247 344 aaKnown RBP11.48□□□□□ -0.57
YBX3-217ENST00000546164 KCNAB1Q14722 419 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SLC5A12Q1EHB4 618 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ARHGAP40Q5TG30 622 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 DUPD1Q68J44 220 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 TTC23LQ6PF05 361 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 FBXO38Q6PIJ6 1188 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 VASH2Q86V25 355 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 LINC01555Q8NAE3 123 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 OR2L8Q8NGY9 312 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CFAP61Q8NHU2 1237 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 GIMAP7Q8NHV1 300 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 HMGCLL1Q8TB92 370 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 MAGEC3Q8TD91 643 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ZNF501Q96CX3 271 aaPredicted RBP11.48□□□□□ -0.57
YBX3-217ENST00000546164 FOPNLQ96NB1 174 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 TRAPPC9Q96Q05 1148 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 OR2A14Q96R47 310 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 AARSD1Q9BTE6 412 aaKnown RBP11.48□□□□□ -0.57
YBX3-217ENST00000546164 RAB11FIP5Q9BXF6 653 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ULBP3Q9BZM4 244 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CCDC68Q9H2F9 335 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
YBX3-217ENST00000546164 SOHLH2Q9NX45 425 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SPHK1Q9NYA1 384 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 GALPQ9UBC7 116 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CDC23Q9UJX2 597 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 PLAGL1Q9UM63 463 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 CHMP2BQ9UQN3 213 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 SNX24Q9Y343 169 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 DHRS7Q9Y394 339 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 NFS1Q9Y697 457 aa11.48□□□□□ -0.57
YBX3-217ENST00000546164 ATRXP46100 2492 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 EIF3FO00303 357 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 PSIP1O75475 530 aaKnown RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 FKBP9O95302 570 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 TIAF1O95411 115 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 MT-ND3P03897 115 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 TUBB4AP04350 444 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 CBSLP0DN79 551 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 ENO3P13929 434 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 GABRB3P28472 473 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 PEBP1P30086 187 aaKnown RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 CBSP35520 551 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 STAT5AP42229 794 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 RHDQ02161 417 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 CKAP4Q07065 602 aaKnown RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 CALCOCO2Q13137 446 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 ACSBG2Q5FVE4 666 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 TEDDM1Q5T9Z0 273 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 C6orf15Q6UXA7 325 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 RASGRP3Q8IV61 690 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 C19orf47Q8N9M1 422 aaKnown RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 FBXO15Q8NCQ5 510 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 LSM14AQ8ND56 463 aaKnown RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 CD200R1Q8TD46 325 aa11.47□□□□□ -0.57
YBX3-217ENST00000546164 SKA2Q8WVK7 121 aaPredicted RBP11.47□□□□□ -0.57
YBX3-217ENST00000546164 INPP5DQ92835 1189 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms