RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 NCF4Q15080 339 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 SLC5A12Q1EHB4 618 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 HOOK3Q86VS8 718 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 DCUN1D3Q8IWE4 304 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 LRRC8AQ8IWT6 810 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 FAM20CQ8IXL6 584 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 TRIM58Q8NG06 486 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 TCTN2Q96GX1 697 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 TSSK1BQ9BXA7 367 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 IL22Q9GZX6 179 aa20.38■□□□□ 0.85
SCARB1-210ENST00000545493 HECTD1Q9ULT8 2610 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 CD3EAPO15446 510 aaKnown RBP20.37■□□□□ 0.85
SCARB1-210ENST00000545493 MAP3K7O43318 606 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 TPSB2P20231 275 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 MGAT1P26572 445 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 AOAHP28039 575 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 CXCR5P32302 372 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 TTPAP49638 278 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 FOXK1P85037 733 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 TPSAB1Q15661 275 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 KYNUQ16719 465 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 ASB18Q6ZVZ8 466 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 GSTA5Q7RTV2 222 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 PRELID2Q8N945 189 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 MAIP1Q8WWC4 291 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 ASZ1Q8WWH4 475 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 IL17FQ96PD4 163 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 SLC7A5P2Q9GIP4 190 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 SERTAD3Q9UJW9 196 aa20.37■□□□□ 0.85
SCARB1-210ENST00000545493 MED13Q9UHV7 2174 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 ISM1B1AKI9 464 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 CEP104O60308 925 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 CBSLP0DN79 551 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 CBSP35520 551 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 PPARGP37231 505 aaPredicted RBP20.36■□□□□ 0.85
SCARB1-210ENST00000545493 KIR2DS3Q14952 304 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 IGFBP7Q16270 282 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 CTSL3PQ5NE16 218 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 UNC5DQ6UXZ4 953 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 C4orf22Q6V702 233 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 TAX1BP1Q86VP1 789 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 MPP5Q8N3R9 675 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 MFSD3Q96ES6 412 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 SPRTNQ9H040 489 aaPredicted RBP20.36■□□□□ 0.85
SCARB1-210ENST00000545493 MRM3Q9HC36 420 aaKnown RBP20.36■□□□□ 0.85
SCARB1-210ENST00000545493 GNPTGQ9UJJ9 305 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 ANAPC5Q9UJX4 755 aa20.36■□□□□ 0.85
SCARB1-210ENST00000545493 TTC7AQ9ULT0 858 aaPredicted RBP20.36■□□□□ 0.85
SCARB1-210ENST00000545493 ZSCAN9O15535 394 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-210ENST00000545493 KDM1AO60341 852 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 OR2B3O76000 313 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 SLCO2B1O94956 709 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 APOA4P06727 396 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 MAGP20916 626 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 RPS3P23396 243 aaKnown RBP eCLIP20.35■□□□□ 0.854e-20■■■■□ 22.5
SCARB1-210ENST00000545493 KCNJ11Q14654 390 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 TMED2Q15363 201 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 TRIP13Q15645 432 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-210ENST00000545493 RHBDD2Q6NTF9 364 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 LRRC8BQ6P9F7 803 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 CES3Q6UWW8 571 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 GPR135Q8IZ08 494 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 ZBTB2Q8N680 514 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 CFAP61Q8NHU2 1237 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 N4BP2L2Q92802 583 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-210ENST00000545493 GBP5Q96PP8 586 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 DPH2Q9BQC3 489 aaPredicted RBP20.35■□□□□ 0.85
SCARB1-210ENST00000545493 KIFC1Q9BW19 673 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 ING2Q9H160 280 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 BFARQ9NZS9 450 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 KLHL20Q9Y2M5 609 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 PPP2R2CQ9Y2T4 447 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 PTPN13Q12923 2485 aa20.35■□□□□ 0.85
SCARB1-210ENST00000545493 KRT87PA6NCN2 255 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 C9J4A7 227 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 RASGRF2O14827 1237 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 RPN2P04844 631 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 HBQ1P09105 142 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 BDKRB1P46663 353 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 GCGRP47871 477 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 NPY2RP49146 381 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 TERF1P54274 439 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 EIF3BP55884 814 aaKnown RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 C1orf189Q5VU69 101 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 PTRHD1Q6GMV3 140 aaKnown RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 TTC27Q6P3X3 843 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 DNAJC22Q8N4W6 341 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 C2orf73Q8N5S3 287 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 LPGAT1Q92604 370 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 PANX3Q96QZ0 392 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 MLXIPLQ9NP71 852 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 ACSS2Q9NR19 701 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 DHCR7Q9UBM7 475 aaKnown RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 SOX13Q9UN79 622 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 RUVBL2Q9Y230 463 aaKnown RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 PCDHGA9Q9Y5G4 932 aaKnown RBP20.34■□□□□ 0.85
SCARB1-210ENST00000545493 NFS1Q9Y697 457 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 AP1M2Q9Y6Q5 423 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 NBASA2RRP1 2371 aa20.34■□□□□ 0.85
SCARB1-210ENST00000545493 GOLGA8KD6RF30 607 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms