RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 CDKL2Q92772 493 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 PDLIM5Q96HC4 596 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 GPR21Q99679 349 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 MAP3K3Q99759 626 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 MTRF1LQ9UGC7 380 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 KLHL3Q9UH77 587 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 LNPEPQ9UIQ6 1025 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 TDRKHQ9Y2W6 561 aaKnown RBP13.34□□□□□ -0.27
TNFSF13B-206ENST00000542136 IGF2RP11717 2491 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 TCRBV9S1A1TA0A576 114 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 FAM159BA6NKW6 160 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 PRAMEF10O60809 474 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 CATP04040 527 aaKnown RBP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 FGF5P12034 268 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SSTR1P30872 391 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 RGS4P49798 205 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 MAPK10P53779 464 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 ACY1Q03154 408 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 NAB1Q13506 487 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 CUL1Q13616 776 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SLC5A12Q1EHB4 618 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 TMTC4Q5T4D3 741 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 ANKS6Q68DC2 871 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SPESP1Q6UW49 350 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SIDT2Q8NBJ9 832 aaKnown RBP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 CFAP61Q8NHU2 1237 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SKA2Q8WVK7 121 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 OR2A14Q96R47 310 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 RHOJQ9H4E5 214 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 LRRC4CQ9HCJ2 640 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 PDE7BQ9NP56 450 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 ACTR10Q9NZ32 417 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 TRMT6Q9UJA5 497 aaKnown RBP13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 SLC39A10Q9ULF5 831 aa13.33□□□□□ -0.28
TNFSF13B-206ENST00000542136 DMXL2Q8TDJ6 3036 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 GSAPA4D1B5 854 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ZNF839A8K0R7 811 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 MYO1CO00159 1063 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 SLC16A5O15375 505 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ZBTB14O43829 449 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ZNF500O60304 480 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 LIPCP11150 499 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ERGP11308 486 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 CDH3P22223 829 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 FDXRP22570 491 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 STX2P32856 288 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ARL4DP49703 201 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 UCNP55089 124 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 GPX6P59796 221 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 IL2P60568 153 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 PPP1CAP62136 330 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 TUBB4BP68371 445 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 MAP7Q14244 749 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 CYP2A13Q16696 494 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 STRA8Q7Z7C7 330 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 OR9A1PQ8NGU1 263 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 FLVCR1-AS1Q8TAF5 88 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 KCNE4Q8WWG9 221 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 TCTN2Q96GX1 697 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 TRAPPC9Q96Q05 1148 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 SLC30A3Q99726 388 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 CPNE1Q99829 537 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 XKR8Q9H6D3 395 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 TMEM184BQ9Y519 407 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 KLK4Q9Y5K2 254 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 B3GALT1Q9Y5Z6 326 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 NFS1Q9Y697 457 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 FREM2Q5SZK8 3169 aa13.32□□□□□ -0.28
TNFSF13B-206ENST00000542136 ACACAQ13085 2346 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 URB1O60287 2271 aaKnown RBP13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 C1QAP02745 245 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 C8GP07360 202 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 UGT2B7P16662 529 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 SEPHS1P49903 392 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 CDKN2DP55273 166 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 POU4F1Q01851 419 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 SP140Q13342 867 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 NAA25Q14CX7 972 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 HECTD2Q5U5R9 776 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 PAQR3Q6TCH7 311 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 IFT20Q8IY31 132 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 LMNTD1Q8N9Z9 388 aa13.31□□□□□ -0.28
TNFSF13B-206ENST00000542136 LINC01555Q8NAE3 123 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms