RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 FOLR3P41439 243 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 AVPR1BP47901 424 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PSMD8P48556 350 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 STK19P49842 368 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 DNA2P51530 1060 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TPI1P60174 286 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SUMO2P61956 95 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 IRX4P78413 519 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TIAL1Q01085 375 aaKnown RBP eCLIP5.4□□□□□ -1.545e-6■■■■□ 21
CPSF7-220ENST00000541963 RAD51Q06609 339 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CSHL1Q14406 222 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CLCA4Q14CN2 919 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PTPRRQ15256 657 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 HADHQ16836 314 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 BOLA3Q53S33 107 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SLC45A4Q5BKX6 768 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC122Q5T0U0 273 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 ALKBH5Q6P6C2 394 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 RINLQ6ZS11 566 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PRPF39Q86UA1 669 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CACUL1Q86Y37 369 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 STK40Q8N2I9 435 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PCDH20Q8N6Y1 951 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC185Q8N715 623 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 OR2T34Q8NGX1 318 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 RSC1A1Q92681 617 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 ARHGEF2Q92974 986 aaKnown RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PPP1R16AQ96I34 528 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC42Q96M95 316 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 Q96MF0 132 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SYT11Q9BT88 431 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 EDEM2Q9BV94 578 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 BRD8Q9H0E9 1235 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 NEUROG2Q9H2A3 272 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TP63Q9H3D4 680 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SERHL2Q9H4I8 314 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SLC32A1Q9H598 525 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 YY1AP1Q9H869 796 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 SAYSD1Q9NPB0 183 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM248Q9NWD8 314 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 TAS2R14Q9NYV8 317 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 KIF17Q9P2E2 1029 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 VPS51Q9UID3 782 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 HS3ST2Q9Y278 367 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 OR51B4Q9Y5P0 310 aa5.4□□□□□ -1.54
CPSF7-220ENST00000541963 PLXND1Q9Y4D7 1925 aa5.4□□□□□ -1.55
CPSF7-220ENST00000541963 SPAG17Q6Q759 2223 aa5.4□□□□□ -1.55
CPSF7-220ENST00000541963 CKAP5Q14008 2032 aa5.4□□□□□ -1.55
CPSF7-220ENST00000541963 CACNA1HO95180 2353 aa5.4□□□□□ -1.55
CPSF7-220ENST00000541963 ABCA7Q8IZY2 2146 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3DA0A087WVF3 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3IA0A087WXS9 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3EA0A087X179 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3KA0A087X1G2 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 A0A0D9SEW6 157 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3FA6NER0 549 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 OR2W5A6NFC9 320 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 FAM47DPA6NHR8 397 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 HMX3A6NHT5 357 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ARHGAP42A6NI28 874 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 C4orf47A7E2U8 309 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 EFCAB8A8MWE9 144 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3LB9A6J9 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 AKR1B15C9JRZ8 316 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 J3KTA2 159 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 EEF2KO00418 725 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PROM1O43490 865 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 DNPH1O43598 174 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 BUB1O43683 1085 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 DFNA5O60443 496 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SNAP91O60641 907 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 MAGEC1O60732 1142 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ACTL6BO94805 426 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TUBB4AP04350 444 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 GYPCP04921 128 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CHRM2P08172 466 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PDHA1P08559 390 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 H2AFZP0C0S5 128 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TBC1D3HP0C7X1 549 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 HKR1P10072 659 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 EGR2P11161 476 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SRCP12931 536 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ENGP17813 658 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ZFP36P26651 326 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CD27P26842 260 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 MIPP30301 263 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 HNRNPH3P31942 346 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CHRNA3P32297 505 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 ACSL1P33121 698 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 PCK1P35558 622 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 GSTM5P46439 218 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 HCAR3P49019 387 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 SERPINH1P50454 418 aaKnown RBP5.39□□□□□ -1.55
CPSF7-220ENST00000541963 CCR5P51681 352 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 NDST2P52849 883 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 GALCP54803 685 aa5.39□□□□□ -1.55
CPSF7-220ENST00000541963 TPTEP56180 551 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms