RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 RPS3P23396 243 aaKnown RBP eCLIP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 PKLRP30613 574 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 TTPAP49638 278 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 EIF3BP55884 814 aaKnown RBP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 ITGA1P56199 1179 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 RPS15P62841 145 aaKnown RBP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 PLOD1Q02809 727 aaPredicted RBP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 TMED2Q15363 201 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 ZIC1Q15915 447 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 PTCHD3Q3KNS1 767 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 PLEKHS1Q5SXH7 462 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 FAM69BQ5VUD6 431 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 TAX1BP1Q86VP1 789 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 FAM20CQ8IXL6 584 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 DSELQ8IZU8 1212 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 MPP5Q8N3R9 675 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 C2orf73Q8N5S3 287 aaPredicted RBP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 MCUQ8NE86 351 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 FLVCR1-AS1Q8TAF5 88 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 IL17FQ96PD4 163 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 FAM60AQ9NP50 221 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 PCMTD2Q9NV79 361 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 GNPTGQ9UJJ9 305 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 TSR3Q9UJK0 312 aaKnown RBP14.46□□□□□ -0.09
RAB40B-202ENST00000538809 TP53TG5Q9Y2B4 290 aa14.46□□□□□ -0.09
RAB40B-202ENST00000538809 A0A0J9YY10 115 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 MEN1O00255 615 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 ZNF185O15231 689 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 MAP3K7O43318 606 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 KIF5CO60282 957 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 NDUFS3O75489 264 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 DNAJB5O75953 348 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 VAPBO95292 243 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 APOA4P06727 396 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 KLK3P07288 261 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 MLNP12872 115 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 AOAHP28039 575 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 RORAP35398 523 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 MAGEA3P43357 314 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 BDKRB1P46663 353 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 FNTAP49354 379 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 CHAF1BQ13112 559 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 TYSND1Q2T9J0 566 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 LACTB2Q53H82 288 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 DNAJC21Q5F1R6 531 aaKnown RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 CPZQ66K79 652 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 KIAA0930Q6ICG6 404 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 FAM198BQ6UWH4 519 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 ZNF517Q6ZMY9 492 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 SYTL1Q8IYJ3 562 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 ENDOVQ8N8Q3 282 aaKnown RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 ASZ1Q8WWH4 475 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 N4BP2L2Q92802 583 aaPredicted RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 LRFN5Q96NI6 719 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 TRIM56Q9BRZ2 755 aaKnown RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 GPR87Q9BY21 358 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 SLC7A5P2Q9GIP4 190 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 SYTL2Q9HCH5 934 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 IL1RAPL1Q9NZN1 696 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 OR6C2Q9NZP2 312 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 SERTAD3Q9UJW9 196 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 RUVBL2Q9Y230 463 aaKnown RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 FARSAQ9Y285 508 aaKnown RBP14.45□□□□□ -0.1
RAB40B-202ENST00000538809 KLHL20Q9Y2M5 609 aa14.45□□□□□ -0.1
RAB40B-202ENST00000538809 NBASA2RRP1 2371 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 KRT87PA6NCN2 255 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 E7EQ34 232 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 K7EM74 188 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 ZNF749O43361 778 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 KDM1AO60341 852 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 RFPL1O75677 317 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 CTSBP07858 339 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 F7P08709 466 aaPredicted RBP14.44□□□□□ -0.1
RAB40B-202ENST00000538809 MSL3P1P0C860 447 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 RAB28P51157 221 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 PMS2P54278 862 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 UGT8Q16880 541 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 CTSL3PQ5NE16 218 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 SYVN1Q86TM6 617 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 DCUN1D3Q8IWE4 304 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 AGGF1Q8N302 714 aaeCLIP14.44□□□□□ -0.1
RAB40B-202ENST00000538809 NAT8LQ8N9F0 302 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 LINC01555Q8NAE3 123 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 FAM136AQ96C01 138 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 BIRC8Q96P09 236 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 SERPINB12Q96P63 405 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 PANX3Q96QZ0 392 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 MENTQ9BUN1 341 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 TRIM55Q9BYV6 548 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 NFS1Q9Y697 457 aa14.44□□□□□ -0.1
RAB40B-202ENST00000538809 NIPSNAP2O75323 286 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 SLCO2B1O94956 709 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 WISP1O95388 367 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 RPN2P04844 631 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 MAGP20916 626 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 GABRA4P48169 554 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 SARNPP82979 210 aaKnown RBP14.43□□□□□ -0.1
RAB40B-202ENST00000538809 TLE1Q04724 770 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 GRB7Q14451 532 aa14.43□□□□□ -0.1
RAB40B-202ENST00000538809 KIR2DS3Q14952 304 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms