RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SLC19A1P41440 591 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 MAGEA9P43362 315 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PHKG1Q16816 387 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CAPN13Q6MZZ7 669 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 FAM43BQ6ZT52 329 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 SCML4Q8N228 414 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PLD6Q8N2A8 252 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 KYQ8NBH2 561 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ATP6V1C2Q8NEY4 427 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 EID2BQ96D98 161 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CMKLR1Q99788 373 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 RHOJQ9H4E5 214 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 TRPV4Q9HBA0 871 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PNO1Q9NRX1 252 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 RALYQ9UKM9 306 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 SCML1Q9UN30 329 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PCDHGB4Q9UN71 923 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ZNF646O15015 1829 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 FAM237BA0A1B0GVD1 139 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 PRR33A8MZF0 331 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 TRIM38O00635 465 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 SLC7A4O43246 635 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ERI3O43414 337 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 MYO1DO94832 1006 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CHN1P15882 459 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 KCNJ11Q14654 390 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 SIX1Q15475 284 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 C6orf132Q5T0Z8 1188 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 C6orf163Q5TEZ5 329 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 FAM45BPQ6NSW5 357 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 DPPA4Q7L190 304 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 HMGN2P46Q86SG4 172 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 CEP97Q8IW35 865 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 SYNPOQ8N3V7 929 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 DTWD1Q8N5C7 304 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ZNF740Q8NDX6 193 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 ZNF548Q8NEK5 533 aaPredicted RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 FAM45AQ8TCE6 357 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 MAGEC3Q8TD91 643 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 KCNN1Q92952 543 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 OR6C1Q96RD1 312 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 OLFM1Q99784 485 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 LIN28AQ9H9Z2 209 aaKnown RBP7.05□□□□□ -1.28
MSH6-209ENST00000538136 PREBQ9HCU5 417 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 WDR37Q9Y2I8 494 aa7.05□□□□□ -1.28
MSH6-209ENST00000538136 RGSL1A5PLK6 1076 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 NPC1O15118 1278 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 OR4F21O95013 312 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 EML2O95834 649 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 MMP2P08253 660 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TROVE2P10155 538 aaKnown RBP eCLIP7.04□□□□□ -1.28
MSH6-209ENST00000538136 ACSM2AQ08AH3 577 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 STX4Q12846 297 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TARDBPQ13148 414 aaKnown RBP eCLIP7.04□□□□□ -1.283e-8■■■■■ 32.2
MSH6-209ENST00000538136 ACSM2BQ68CK6 577 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 AGTRAPQ6RW13 159 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 FAM83HQ6ZRV2 1179 aaPredicted RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 CCNJLQ8IV13 435 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 PARP9Q8IXQ6 854 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SLC22A15Q8IZD6 547 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 FSTL5Q8N475 847 aaPredicted RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 OXR1Q8N573 874 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TRAM1L1Q8N609 369 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 RNF148Q8N7C7 305 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 PNPT1Q8TCS8 783 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 EXOSC8Q96B26 276 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 CCDC124Q96CT7 223 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 C17orf62Q9BQA9 187 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 BRINP2Q9C0B6 783 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 BAIAP2L1Q9UHR4 511 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 WASH4PA8MWX3 477 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ALOX15BO15296 676 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SERPINI2O75830 405 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 KIAA0754O94854 1291 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TNFSF15O95150 251 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ESR1P03372 595 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 TPSB2P20231 275 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ACRV1P26436 265 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SKIV2L2P42285 1042 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 GPX6P59796 221 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 MAT1AQ00266 395 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 SLBPQ14493 270 aaKnown RBP eCLIP7.04□□□□□ -1.28
MSH6-209ENST00000538136 TPSAB1Q15661 275 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 RSPO4Q2I0M5 234 aaPredicted RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 GPR33Q49SQ1 333 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 BEND6Q5SZJ8 279 aaPredicted RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 TEDDM1Q5T9Z0 273 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ZDHHC20Q5W0Z9 365 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 SLC35F3Q8IY50 421 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 NLGN4XQ8N0W4 816 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 FNDC5Q8NAU1 212 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 OR52E1Q8NGJ3 308 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 OR13J1Q8NGT2 312 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ANKRD49Q8WVL7 239 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ISG20Q96AZ6 181 aaKnown RBP7.04□□□□□ -1.28
MSH6-209ENST00000538136 KCNA7Q96RP8 456 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 LRRC61Q9BV99 259 aa7.04□□□□□ -1.28
MSH6-209ENST00000538136 ULBP3Q9BZM4 244 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms