RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 IL17RCQ8NAC3 791 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 OSR1Q8TAX0 266 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 WIPF2Q8TF74 440 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 NRGNQ92686 78 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ARHGEF2Q92974 986 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 MAP7D2Q96T17 732 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 RIOK1Q9BRS2 568 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 GPR88Q9GZN0 384 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ZDHHC4Q9NPG8 344 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ECHDC1Q9NTX5 307 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 NKIRAS2Q9NYR9 191 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ERAP1Q9NZ08 941 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 CTNNAL1Q9UBT7 734 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 PCDHGB4Q9UN71 923 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 A4GNTQ9UNA3 340 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ARID2Q68CP9 1835 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF500O60304 480 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CRLF1O75462 422 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 RNF8O76064 485 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 SORBS2O94875 1100 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 OR2C1O95371 312 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CSH1P0DML2 217 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CSH2P0DML3 217 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 TGFB3P10600 412 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 MCCP23508 829 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 HTR1EP28566 365 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 TTKP33981 857 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 TCF7P36402 384 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 UBA7P41226 1012 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 GNAQP50148 359 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CLDN2P57739 230 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 GRIK3Q13003 919 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 ALG11Q2TAA5 492 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 KLHL35Q6PF15 583 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CYB5R4Q7L1T6 521 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 C1orf131Q8NDD1 294 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 BCAS4Q8TDM0 211 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 SAP25Q8TEE9 199 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 PSPC1Q8WXF1 523 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 C19orf24Q9BVV8 132 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 ACTR5Q9H9F9 607 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 PIH1D3Q9NQM4 214 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 EHD2Q9NZN4 543 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 UTS2RQ9UKP6 389 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 PA2G4Q9UQ80 394 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 KIF26BQ2KJY2 2108 aa4.49□□□□□ -1.69
ECHDC1-223ENST00000534442 CHD3Q12873 2000 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 NUP210Q8TEM1 1887 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ARHGEF37A1IGU5 675 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ANKUB1A6NFN9 424 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 LRRC53A6NM62 1247 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 FOXO6A8MYZ6 492 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 NPIPB11E5RHQ5 1161 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC25A17O43808 307 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PLOD3O60568 738 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 UGDHO60701 494 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 FZD7O75084 574 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 TMCC1O94876 653 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 IFNA2P01563 188 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 IGLV2-14P01704 120 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 LCKP06239 509 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC2A4P14672 509 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CDH2P19022 906 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 RRM1P23921 792 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 POU1F1P28069 291 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 OR1D2P34982 312 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC16A2P36021 539 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PPARGP37231 505 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PSMB10P40306 273 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CENPAP49450 140 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC12A2P55011 1212 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PROK1P58294 105 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 YWHAZP63104 245 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 HSF1Q00613 529 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 PMPCAQ10713 525 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 FRG1Q14331 258 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 IRF3Q14653 427 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF630Q2M218 657 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 NADK2Q4G0N4 442 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 MIDNQ504T8 468 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CCDC158Q5M9N0 1113 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 EOGTQ5NDL2 527 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CFAP58Q5T655 872 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 C12orf60Q5U649 245 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 AAGABQ6PD74 315 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 LRIG3Q6UXM1 1119 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 C16orf47Q6ZP98 133 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 NCCRP1Q6ZVX7 275 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 CADM3Q8N126 398 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 SRBD1Q8N5C6 995 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 WFDC11Q8NEX6 87 aa4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 WDR36Q8NI36 951 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-223ENST00000534442 LNX1Q8TBB1 728 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms