RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TSPY8P0CW00 308 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KRT3P12035 628 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ITGA2P17301 1181 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 HOXB9P17482 250 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ARF4P18085 180 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PSMA2P25787 234 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KLRK1P26718 216 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 GSTM2P28161 218 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 HOXA6P31267 233 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ADD2P35612 726 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 RPL5P46777 297 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TUBP50607 506 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 NEK3P51956 506 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 AP2S1P53680 142 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 VCPP55072 806 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TSPY1Q01534 308 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF33BQ06732 778 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ENPEPQ07075 957 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 COASYQ13057 564 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 DHX34Q14147 1143 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 LPIN1Q14693 890 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PUM3Q15397 648 aaKnown RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 GALNTL6Q49A17 601 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZC2HC1CQ53FD0 456 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KRBOX4Q5JUW0 171 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OTUD1Q5VV17 481 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 HMBOX1Q6NT76 420 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 NFRKBQ6P4R8 1299 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MFSD6Q6ZSS7 791 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 USP50Q70EL3 339 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 RAB11FIP2Q7L804 512 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PIGWQ7Z7B1 504 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CCDC25Q86WR0 208 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PALB2Q86YC2 1186 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MMGT1Q8N4V1 131 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 DPP10Q8N608 796 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF565Q8N9K5 539 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KBTBD3Q8NAB2 608 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF527Q8NB42 609 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 C7orf57Q8NEG2 295 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OR6S1Q8NH40 331 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 OR8K3Q8NH51 312 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 LHFPL5Q8TAF8 219 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CHPT1Q8WUD6 406 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 SCFD1Q8WVM8 642 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ASB5Q8WWX0 329 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KAT2AQ92830 837 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MIB2Q96AX9 1013 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 C18orf8Q96DM3 657 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CCDC51Q96ER9 411 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MCRS1Q96EZ8 462 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 YME1L1Q96TA2 773 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 NEURL2Q9BR09 285 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 NT5C3AQ9H0P0 336 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ISCUQ9H1K1 167 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MYLK2Q9H1R3 596 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 PPCSQ9HAB8 311 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 KCNK13Q9HB14 408 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 SYTL2Q9HCH5 934 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TUFT1Q9NNX1 390 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CHST12Q9NRB3 414 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 TBC1D22BQ9NU19 505 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF624Q9P2J8 865 aaPredicted RBP4.2□□□□□ -1.74
ITGB1-219ENST00000534049 MOSPD1Q9UJG1 213 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 GNPTGQ9UJJ9 305 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF112Q9UJU3 913 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 AP3M1Q9Y2T2 418 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CACNG2Q9Y698 323 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 WDR19Q8NEZ3 1342 aa4.2□□□□□ -1.74
ITGB1-219ENST00000534049 CHD4Q14839 1912 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 LOC100653049A0A140TA62 436 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 FAM237AA0A1B0GTK4 181 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 A0A1B0GWJ7 208 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 ARHGEF35A5YM69 484 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 SMCO2A6NFE2 343 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 SAC3D1A6NKF1 404 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 OR6C75A6NL08 312 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF701M0R085 212 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-219ENST00000534049 KPNA4O00629 521 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-219ENST00000534049 ACOT8O14734 319 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 ACOX3O15254 700 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 POLR2DO15514 142 aaKnown RBP4.19□□□□□ -1.74
ITGB1-219ENST00000534049 CLN5O75503 358 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 KRT34O76011 436 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 RSL1D1O76021 490 aaKnown RBP4.19□□□□□ -1.74
ITGB1-219ENST00000534049 CAPN1P07384 714 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 GFAPP14136 432 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 CCNB1P14635 433 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 CPA1P15085 419 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 ARSBP15848 533 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 PDGFRAP16234 1089 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 CDC25CP30307 473 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 GTF2H1P32780 548 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 HOXD13P35453 343 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 SOX6P35712 828 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 PRCPP42785 496 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 MAGEA11P43364 429 aa4.19□□□□□ -1.74
ITGB1-219ENST00000534049 SLC9A3P48764 834 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms