RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SYTL2Q9HCH5 934 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 PCMTD2Q9NV79 361 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 KLHL20Q9Y2M5 609 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 PIKFYVEQ9Y2I7 2098 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 H3BMH7 237 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 K7EM74 188 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 MAP3K7O43318 606 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 ZNF749O43361 778 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 RECKO95980 971 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 KLK3P07288 261 aaPredicted RBP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 RPS3P23396 243 aaKnown RBP eCLIP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 FMO4P31512 558 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 RPS15P62841 145 aaKnown RBP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 IL10RAQ13651 578 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 CYP1B1Q16678 543 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 PTCHD3Q3KNS1 767 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 CCDC137Q6PK04 289 aaKnown RBP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 C9orf43Q8TAL5 461 aaPredicted RBP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 TCTN2Q96GX1 697 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 IL1RAPL1Q9NZN1 696 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 GNPTGQ9UJJ9 305 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 RUVBL2Q9Y230 463 aaKnown RBP18.04■□□□□ 0.48
SPIDR-220ENST00000522900 POLHQ9Y253 713 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 NFS1Q9Y697 457 aa18.04■□□□□ 0.48
SPIDR-220ENST00000522900 A0A0J9YY10 115 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 KRT87PA6NCN2 255 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 E7EQ34 232 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 GOLGA8MH3BSY2 632 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 ZNF185O15231 689 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 CAPN1P07384 714 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 F7P08709 466 aaPredicted RBP18.03■□□□□ 0.48
SPIDR-220ENST00000522900 NR1D1P20393 614 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 RAB28P51157 221 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 ITGA1P56199 1179 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 KIR2DS3Q14952 304 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 CCSMST1Q4G0I0 132 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 IZUMO3Q5VZ72 239 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 LRRC6Q86X45 466 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 SPNS2Q8IVW8 549 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 AGGF1Q8N302 714 aaeCLIP18.03■□□□□ 0.48
SPIDR-220ENST00000522900 DNAJC22Q8N4W6 341 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 LPGAT1Q92604 370 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 FAM136AQ96C01 138 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 PANX3Q96QZ0 392 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 OSBPL9Q96SU4 736 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 TRMT1Q9NXH9 659 aaKnown RBP18.03■□□□□ 0.48
SPIDR-220ENST00000522900 GALPQ9UBC7 116 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 CRYL1Q9Y2S2 319 aa18.03■□□□□ 0.48
SPIDR-220ENST00000522900 PGRMC1O00264 195 aaKnown RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 NIPSNAP2O75323 286 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 CD9P21926 228 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SARNPP82979 210 aaKnown RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 TMED2Q15363 201 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 UGT8Q16880 541 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SLC5A12Q1EHB4 618 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 TYSND1Q2T9J0 566 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 COLEC12Q5KU26 742 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 KIAA0930Q6ICG6 404 aaPredicted RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 MRNIPQ6NTE8 343 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 CASC4Q6P4E1 433 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 UNC5DQ6UXZ4 953 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 ATG14Q6ZNE5 492 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 CENPUQ71F23 418 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 OTOAQ7RTW8 1153 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SDCCAG8Q86SQ7 713 aaPredicted RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SYVN1Q86TM6 617 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 TAX1BP1Q86VP1 789 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 DCUN1D3Q8IWE4 304 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SYTL1Q8IYJ3 562 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 ENDOVQ8N8Q3 282 aaKnown RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 TRIM55Q9BYV6 548 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 TSR3Q9UJK0 312 aaKnown RBP18.02■□□□□ 0.48
SPIDR-220ENST00000522900 MAN2B2Q9Y2E5 1009 aa18.02■□□□□ 0.48
SPIDR-220ENST00000522900 SDR42E2A6NKP2 422 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 KDM1AO60341 852 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 DNAJB5O75953 348 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 OR2B3O76000 313 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 C1orf105O95561 183 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 ATXN8OSP0DMR3 200 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 MAGP20916 626 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 BDKRB1P46663 353 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 ANKRD20A4Q4UJ75 823 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 ZNF385CQ66K41 422 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-220ENST00000522900 NEPROQ6NW34 567 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 FAM198BQ6UWH4 519 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 MCUQ8NE86 351 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 ACTRT1Q8TDG2 376 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 SKA2Q8WVK7 121 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-220ENST00000522900 N4BP2L2Q92802 583 aaPredicted RBP18.01■□□□□ 0.47
SPIDR-220ENST00000522900 SERPINB12Q96P63 405 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 TCF12Q99081 682 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 NLNQ9BYT8 704 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 SLC7A5P2Q9GIP4 190 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 CHRNA10Q9GZZ6 450 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 TLK1Q9UKI8 766 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 TP53TG5Q9Y2B4 290 aa18.01■□□□□ 0.47
SPIDR-220ENST00000522900 ZCWPW2A0A1B0GU75 182 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 RASGRF2O14827 1237 aa18■□□□□ 0.47
SPIDR-220ENST00000522900 KPNA5O15131 536 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms