RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ARNTLO00327 626 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SCAMP1O15126 338 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 AVILO75366 819 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 RFPL3O75679 317 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 BEST1O76090 585 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MED26O95402 600 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PEX11BO96011 259 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PLATP00750 562 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SNRNP70P08621 437 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 KITP10721 976 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SPI1P17947 270 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MSX1P28360 303 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 RFC2P35250 354 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 STAT5AP42229 794 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 KCNC1P48547 511 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CLCNKAP51800 687 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PRMT2P55345 433 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ERVK-25P63136 954 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 IFRD2Q12894 506 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CEACAM7Q14002 265 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SMCO1Q147U7 214 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DRAP1Q14919 205 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 LLGL1Q15334 1064 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SMAD1Q15797 465 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 KCNA10Q16322 511 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CCDC142Q17RM4 750 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 COL28A1Q2UY09 1125 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 FAM102BQ5T8I3 360 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 FBXO31Q5XUX0 539 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SLC30A6Q6NXT4 461 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SLC26A9Q7LBE3 791 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CENPLQ8N0S6 344 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PGAM4Q8N0Y7 254 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 EMC1Q8N766 993 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 GDPD1Q8N9F7 314 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF511Q8NB15 262 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SLC25A36Q96CQ1 311 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ASB9Q96DX5 294 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 WBP1Q96G27 269 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 FBXL20Q96IG2 436 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PFDN5Q99471 154 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 C1QTNF1Q9BXJ1 281 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ERVK-6Q9BXR3 956 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 UNKLQ9H9P5 680 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 SAYSD1Q9NPB0 183 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ENTPD7Q9NQZ7 604 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DPP3Q9NY33 737 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 H2AFY2Q9P0M6 372 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ERVK-18Q9QC07 812 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MARCOQ9UEW3 520 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 UTYO14607 1347 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 NWD2Q9ULI1 1742 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PTPRMP28827 1452 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 TEX13CA0A0J9YWL9 993 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PNMA8CA0A1B0GUJ8 204 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MYMKA6NI61 221 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DIRAS3O95661 229 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ACSM4P0C7M7 580 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CCNYL3P0C7X3 344 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 TXNP10599 105 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 NSFP46459 744 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 NUDT2P50583 147 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ALDH3A2P51648 485 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 GABARAPL2P60520 117 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 TFAMQ00059 246 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ILF3Q12906 894 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DMP1Q13316 513 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 INPP5AQ14642 412 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 HFEQ30201 348 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ZNF528Q3MIS6 628 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ACER2Q5QJU3 275 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 INTS5Q6P9B9 1019 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ZFAND4Q86XD8 727 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MICU3Q86XE3 530 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MCEMP1Q8IX19 187 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 RNF113BQ8IZP6 322 aaKnown RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DHRSXQ8N5I4 330 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 DCAKDQ8WVC6 231 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 CYGBQ8WWM9 190 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 TNFRSF14Q92956 283 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 USP7Q93009 1102 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 GJA10Q969M2 543 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 BEX2Q9BXY8 128 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PRRG3Q9BZD7 231 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MS4A7Q9GZW8 240 aaPredicted RBP8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ACP6Q9NPH0 428 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 MED9Q9NWA0 146 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 OPTCQ9UBM4 332 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 IL19Q9UHD0 177 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PCDHGC4Q9Y5F7 938 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PCDHGA6Q9Y5G7 932 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 PCDHGA5Q9Y5G8 931 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 U3KQV3 271 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 TANC1Q9C0D5 1861 aa8.13□□□□□ -1.11
HMGB4-204ENST00000522796 ABHD14A-ACY1A0A1B0GW23 586 aa8.12□□□□□ -1.11
HMGB4-204ENST00000522796 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
HMGB4-204ENST00000522796 TCRBV7S2A1N4TA0A589 114 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms