RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 C1QTNF3Q9BXJ4 246 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 MVB12BQ9H7P6 319 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 STOX2Q9P2F5 926 aaPredicted RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 PCTPQ9UKL6 214 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 ABCA7Q8IZY2 2146 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 MUC6Q6W4X9 2439 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 A6NCN8 305 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 STK16O75716 305 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 DRD4P21917 467 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 GGT5P36269 586 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 CTSKP43235 329 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 CLCQ05315 142 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 AGTRAPQ6RW13 159 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 CRLF3Q8IUI8 442 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 LSMEM2Q8N112 164 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 TEX9Q8N6V9 391 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 TRPC4APQ8TEL6 797 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 ZNF483Q8TF39 744 aaPredicted RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 CXorf40BQ96DE9 158 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 SORT1Q99523 831 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 NSRP1Q9H0G5 558 aaKnown RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 ERVMER34-1Q9H9K5 563 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 EML4Q9HC35 981 aaKnown RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 SEMA4BQ9NPR2 832 aaPredicted RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 PSD3Q9NYI0 1048 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 OPTCQ9UBM4 332 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 POLG2Q9UHN1 485 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 DOLKQ9UPQ8 538 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 ANGPTL3Q9Y5C1 460 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 COLEC10Q9Y6Z7 277 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 PRAMEF33A0A0G2JMD5 474 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 E2F3O00716 465 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 SDC3O75056 442 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 CFIP05156 583 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 IMPA1P29218 277 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 NAA20P61599 178 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 BNC1Q01954 994 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 ZXDCQ2QGD7 858 aaPredicted RBP20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 PTCHD3Q3KNS1 767 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 IYDQ6PHW0 289 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 GKN2Q86XP6 184 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 SYTL1Q8IYJ3 562 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 ZNF480Q8WV37 535 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 PYCR2Q96C36 320 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 MED8Q96G25 268 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 CAMK1GQ96NX5 476 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 TRMOQ9BU70 441 aa20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 ZNF624Q9P2J8 865 aaPredicted RBP20.77■□□□□ 0.92
R3HCC1-208ENST00000522012 K7EPI3 171 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 AQP9O43315 295 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 WDR47O94967 919 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 DPP6P42658 865 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 NUBP1P53384 320 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 SF3A3Q12874 501 aaKnown RBP eCLIP20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 NAE1Q13564 534 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 GTF2H2Q13888 395 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 GRB7Q14451 532 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 RBBP7Q16576 425 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 DUOXA1Q1HG43 343 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 PEAR1Q5VY43 1037 aaPredicted RBP20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 GTF2H2CQ6P1K8 395 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 GOLGA7Q7Z5G4 137 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 PPFIBP2Q8ND30 876 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 ZNF548Q8NEK5 533 aaPredicted RBP20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 AGR3Q8TD06 166 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 IL17FQ96PD4 163 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 CCT8L2Q96SF2 557 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 ILKAPQ9H0C8 392 aaPredicted RBP20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 SLC32A1Q9H598 525 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 ABCF3Q9NUQ8 709 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 LNPEPQ9UIQ6 1025 aa20.76■□□□□ 0.91
R3HCC1-208ENST00000522012 ZDBF2Q9HCK1 2354 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 PPP6CO00743 305 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 KITP10721 976 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 SLC6A12P48065 614 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 PNLIPRP1P54315 467 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 NHLH1Q02575 133 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 TSTA3Q13630 321 aaPredicted RBP20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 METTL2BQ6P1Q9 378 aaKnown RBP20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 TRIM48Q8IWZ4 208 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 SNX31Q8N9S9 440 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 LMNTD1Q8N9Z9 388 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 ZDHHC1Q8WTX9 485 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 ZBTB26Q9HCK0 441 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 FSCN3Q9NQT6 498 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 PNPOQ9NVS9 261 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 MARCOQ9UEW3 520 aaPredicted RBP20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 RAP2CQ9Y3L5 183 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 R4GN57 208 aa20.75■□□□□ 0.91
R3HCC1-208ENST00000522012 B4DGG1 531 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 UBFD1O14562 309 aaKnown RBP20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 YY2O15391 372 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 PIAS2O75928 621 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 SNUPNO95149 360 aaKnown RBP20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 MLYCDO95822 493 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 SLC2A4P14672 509 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 MPSTP25325 297 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 NDUFS1P28331 727 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 HOXD12P35452 270 aa20.74■□□□□ 0.91
R3HCC1-208ENST00000522012 SLC19A1P41440 591 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms