RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 LRRK2Q5S007 2527 aa20.92■□□□□ 0.94
CHMP7-205ENST00000519503 ARGFXA6NJG6 315 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 ISM1B1AKI9 464 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CD3EAPO15446 510 aaKnown RBP20.91■□□□□ 0.94
CHMP7-205ENST00000519503 GPC4O75487 556 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 FGGP02679 453 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CAPN1P07384 714 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 TPBGLP0DKB5 382 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 PKLRP30613 574 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 PTGIRP43119 386 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 NPY2RP49146 381 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CSE1LP55060 971 aaKnown RBP20.91■□□□□ 0.94
CHMP7-205ENST00000519503 SESN2P58004 480 aaPredicted RBP20.91■□□□□ 0.94
CHMP7-205ENST00000519503 BASP1P80723 227 aaKnown RBP20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CDK16Q00536 496 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 PTCHD3Q3KNS1 767 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CPZQ66K79 652 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 LRRC6Q86X45 466 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 DCUN1D3Q8IWE4 304 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 TRIM58Q8NG06 486 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 SLC22A18Q96BI1 424 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 PANX3Q96QZ0 392 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 SLC25A23Q9BV35 468 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 TREX1Q9NSU2 369 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 GNPTGQ9UJJ9 305 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 PLAGL1Q9UM63 463 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 G3BP2Q9UN86 482 aaKnown RBP20.91■□□□□ 0.94
CHMP7-205ENST00000519503 SRPK3Q9UPE1 567 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 CDYLQ9Y232 598 aa20.91■□□□□ 0.94
CHMP7-205ENST00000519503 KPNA5O15131 536 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 ZSCAN9O15535 394 aaPredicted RBP20.9■□□□□ 0.94
CHMP7-205ENST00000519503 SLCO2B1O94956 709 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 CD63P08962 238 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 AOAHP28039 575 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 ZIC1Q15915 447 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 KYNUQ16719 465 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 ZNF385CQ66K41 422 aaPredicted RBP20.9■□□□□ 0.94
CHMP7-205ENST00000519503 PTRHD1Q6GMV3 140 aaKnown RBP20.9■□□□□ 0.94
CHMP7-205ENST00000519503 RHBDD2Q6NTF9 364 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 TLDC1Q6P9B6 456 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 GSDMBQ8TAX9 411 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 PROKR1Q8TCW9 393 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 MARCH4Q9P2E8 410 aaPredicted RBP20.9■□□□□ 0.94
CHMP7-205ENST00000519503 PCDHGB7Q9Y5F8 929 aa20.9■□□□□ 0.94
CHMP7-205ENST00000519503 H3BMH7 237 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 TMEM63AO94886 807 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 GABRA4P48169 554 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 RRADP55042 308 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 CHAF1BQ13112 559 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 DEFB110Q30KQ9 67 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 PAPD7Q5XG87 772 aaKnown RBP20.89■□□□□ 0.93
CHMP7-205ENST00000519503 MED25Q71SY5 747 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 RAB43Q86YS6 212 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 VRK3Q8IV63 474 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 TMEM102Q8N9M5 508 aaPredicted RBP20.89■□□□□ 0.93
CHMP7-205ENST00000519503 LKAAEAR1Q8TD35 194 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 RAB11FIP5Q9BXF6 653 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 MRM3Q9HC36 420 aaKnown RBP20.89■□□□□ 0.93
CHMP7-205ENST00000519503 MLXIPLQ9NP71 852 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 PLCL2Q9UPR0 1127 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 MRFAP1Q9Y605 127 aa20.89■□□□□ 0.93
CHMP7-205ENST00000519503 IQCF5A8MTL0 148 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 TPSB2P20231 275 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 CD9P21926 228 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 PEBP1P30086 187 aaKnown RBP20.88■□□□□ 0.93
CHMP7-205ENST00000519503 CCL11P51671 97 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 CRADDP78560 199 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 TPSAB1Q15661 275 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 IGFBP7Q16270 282 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 ARMC3Q5W041 872 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 TTC23LQ6PF05 361 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 LDB1Q86U70 411 aaPredicted RBP20.88■□□□□ 0.93
CHMP7-205ENST00000519503 DNAJC22Q8N4W6 341 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 CFAP61Q8NHU2 1237 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 IP6K3Q96PC2 410 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 MENTQ9BUN1 341 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 P2RY12Q9H244 342 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 TXLNGQ9NUQ3 528 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 INTS7Q9NVH2 962 aaKnown RBP20.88■□□□□ 0.93
CHMP7-205ENST00000519503 IRAK4Q9NWZ3 460 aa20.88■□□□□ 0.93
CHMP7-205ENST00000519503 GPN3Q9UHW5 284 aaPredicted RBP20.88■□□□□ 0.93
CHMP7-205ENST00000519503 PFDN6O15212 129 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 NRDCO43847 1150 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 CEP104O60308 925 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 NDUFS3O75489 264 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 CEACAM4O75871 244 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 S1PR4O95977 384 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 PDGFAP04085 211 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 RPS3P23396 243 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHMP7-205ENST00000519503 DCDP81605 110 aaKnown RBP20.87■□□□□ 0.93
CHMP7-205ENST00000519503 RNF187Q5TA31 235 aaPredicted RBP20.87■□□□□ 0.93
CHMP7-205ENST00000519503 MRNIPQ6NTE8 343 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 LRRC8BQ6P9F7 803 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 OTOAQ7RTW8 1153 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 ATCAYQ86WG3 371 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 HPS6Q86YV9 775 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 KRT222Q8N1A0 295 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 RAB42Q8N4Z0 105 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 LINC01555Q8NAE3 123 aa20.87■□□□□ 0.93
CHMP7-205ENST00000519503 OR2L8Q8NGY9 312 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms