RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 PLEKHS1Q5SXH7 462 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 RNF187Q5TA31 235 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 ARMC3Q5W041 872 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 SPESP1Q6UW49 350 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 SYDE1Q6ZW31 735 aaPredicted RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 PCGF5Q86SE9 256 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 ANKMY2Q8IV38 441 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 SLC38A9Q8NBW4 561 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 DENND1AQ8TEH3 1009 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 NDNQ99608 321 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 SLC12A9Q9BXP2 914 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 DPH5Q9H2P9 285 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 INTS10Q9NVR2 710 aaKnown RBP12.87□□□□□ -0.35
VEGFA-219ENST00000518824 POLG2Q9UHN1 485 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 LNPEPQ9UIQ6 1025 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 RARRES3Q9UL19 164 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 TEX264Q9Y6I9 313 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
VEGFA-219ENST00000518824 EFCAB8A8MWE9 144 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 C2orf74A8MZ97 194 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ISM1B1AKI9 464 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 F8W8V4 182 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 PSMB5P28074 263 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 CARSP49589 748 aaKnown RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ARL4DP49703 201 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ATP1A2P50993 1020 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 YBX1P67809 324 aaKnown RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 FASTKQ14296 549 aaKnown RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 IL11RAQ14626 422 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 TMED2Q15363 201 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 KLHL38Q2WGJ6 581 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 RBM20Q5T481 1227 aaKnown RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 LCN10Q6JVE6 187 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 UNC5DQ6UXZ4 953 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 PPP1R3BQ86XI6 285 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 KMT5CQ86Y97 462 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 DCUN1D3Q8IWE4 304 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ZBTB2Q8N680 514 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 C2CD4AQ8NCU7 369 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 OR1L3Q8NH93 324 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 SKA2Q8WVK7 121 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 SNF8Q96H20 258 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 C16orf45Q96MC5 204 aaPredicted RBP12.86□□□□□ -0.35
VEGFA-219ENST00000518824 GPR21Q99679 349 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ZPBPQ9BS86 351 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 LATS2Q9NRM7 1088 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
VEGFA-219ENST00000518824 ARHGEF33A8MVX0 844 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 MATN2O00339 956 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 TERTO14746 1132 aaKnown RBP12.85□□□□□ -0.35
VEGFA-219ENST00000518824 NKX2-8O15522 239 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 PRICKLE3O43900 615 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-219ENST00000518824 NRP2O60462 931 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 PIAS1O75925 651 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 MATN4O95460 622 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 CD9P21926 228 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 STAT5AP42229 794 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 GABRA4P48169 554 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 RAB28P51157 221 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 TUBB4BP68371 445 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 ACY1Q03154 408 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 LY6DQ14210 128 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 LINC00303Q3SY05 128 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
VEGFA-219ENST00000518824 SPANXN3Q5MJ09 141 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 CD200R1Q8TD46 325 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 EXTL1Q92935 676 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 RUNDC3BQ96NL0 473 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 AARSD1Q9BTE6 412 aaKnown RBP12.85□□□□□ -0.35
VEGFA-219ENST00000518824 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 PDE7BQ9NP56 450 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 GRHL1Q9NZI5 618 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 FER1L5A0AVI2 2057 aa12.85□□□□□ -0.35
VEGFA-219ENST00000518824 A0A1W2PPV9 198 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 TMEM150CB9EJG8 249 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 E5RI56 91 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 H3BMH7 237 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 H3BMM5 538 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 RASGRF2O14827 1237 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 KPNA5O15131 536 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 C1QL1O75973 258 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 AHSGP02765 367 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 CDKN2DP55273 166 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 ABHD18Q0P651 414 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 PDIA2Q13087 525 aaKnown RBP12.84□□□□□ -0.35
VEGFA-219ENST00000518824 GPS2Q13227 327 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 HIF1AQ16665 826 aa12.84□□□□□ -0.35
VEGFA-219ENST00000518824 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms