RNA–Protein interactions for RNA: ENST00000517791.1

CD74-205, Transcript of CD74 molecule, humanhuman

TSL 3

Gene CD74, Length 1,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-205ENST00000517791 CCR7P32248 378 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 CXCR5P32302 372 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 RAB28P51157 221 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 PGDP52209 483 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 CRADDP78560 199 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 SIX1Q15475 284 aaPredicted RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 SLC5A12Q1EHB4 618 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 PTCHD3Q3KNS1 767 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 RNF187Q5TA31 235 aaPredicted RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 TCTN3Q6NUS6 607 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 CASC4Q6P4E1 433 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 UNC5DQ6UXZ4 953 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 ZNF534Q76KX8 674 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 OTOAQ7RTW8 1153 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 OR2A14Q96R47 310 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 NRTNQ99748 197 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 NDC1Q9BTX1 674 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 RAB11FIP5Q9BXF6 653 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 EPN3Q9H201 632 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 AKIRIN1Q9H9L7 192 aaPredicted RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 PCMTD2Q9NV79 361 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 INTS7Q9NVH2 962 aaKnown RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 SAMD15Q9P1V8 674 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 SRPK3Q9UPE1 567 aa12.67□□□□□ -0.38
CD74-205ENST00000517791 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
CD74-205ENST00000517791 IQCF5A8MTL0 148 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 ZSCAN9O15535 394 aaPredicted RBP12.66□□□□□ -0.38
CD74-205ENST00000517791 VAPBO95292 243 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 CD63P08962 238 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 ATXN8OSP0DMR3 200 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 MGAT1P26572 445 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 PKLRP30613 574 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 RORAP35398 523 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 KCNJ1P48048 391 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 VPS41P49754 854 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 TERF1P54274 439 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 IL10RAQ13651 578 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 SEMA3AQ14563 771 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 NCF4Q15080 339 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 TLDC1Q6P9B6 456 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 ZNF517Q6ZMY9 492 aaPredicted RBP12.66□□□□□ -0.38
CD74-205ENST00000517791 RAB43Q86YS6 212 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 SLC38A9Q8NBW4 561 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 NAP1L3Q99457 506 aaPredicted RBP12.66□□□□□ -0.38
CD74-205ENST00000517791 DHRS4Q9BTZ2 278 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 SLC25A23Q9BV35 468 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 ING2Q9H160 280 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 SPHK1Q9NYA1 384 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 MARCH4Q9P2E8 410 aaPredicted RBP12.66□□□□□ -0.38
CD74-205ENST00000517791 NDOR1Q9UHB4 597 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 TTC7AQ9ULT0 858 aaPredicted RBP12.66□□□□□ -0.38
CD74-205ENST00000517791 PLCL2Q9UPR0 1127 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
CD74-205ENST00000517791 H3BMM5 538 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 GPC4O75487 556 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 DNAJB5O75953 348 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 S1PR4O95977 384 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 TPSB2P20231 275 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 NR1D1P20393 614 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 CD9P21926 228 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 AOAHP28039 575 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 NMBRP28336 390 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 CCL11P51671 97 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 RRADP55042 308 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 GPS1Q13098 491 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 CHAF1BQ13112 559 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 TRIP13Q15645 432 aaPredicted RBP12.65□□□□□ -0.38
CD74-205ENST00000517791 TPSAB1Q15661 275 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 DEFB110Q30KQ9 67 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 ZNF789Q5FWF6 425 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 TAX1BP1Q86VP1 789 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 PROKR1Q8TCW9 393 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 LKAAEAR1Q8TD35 194 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 MAGEC3Q8TD91 643 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 CHRNA10Q9GZZ6 450 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
CD74-205ENST00000517791 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 TREX1Q9NSU2 369 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 SYBUQ9NX95 663 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 IFT80Q9P2H3 777 aaPredicted RBP12.65□□□□□ -0.38
CD74-205ENST00000517791 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
CD74-205ENST00000517791 SEC16AO15027 2179 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
CD74-205ENST00000517791 E5RI56 91 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 PEX12O00623 359 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 TMEM63AO94886 807 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 SLCO2B1O94956 709 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 KRT14P02533 472 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.391e-8■■■■□ 21
CD74-205ENST00000517791 OTX2P32243 289 aa12.64□□□□□ -0.39
CD74-205ENST00000517791 CCNFP41002 786 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms