RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PDE12Q6L8Q7 609 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 OR10G2Q8NGC3 310 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TWNKQ96RR1 684 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 GPER1Q99527 375 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SLC32A1Q9H598 525 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TVP23BQ9NYZ1 205 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ACTR3BQ9P1U1 418 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 GPN3Q9UHW5 284 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CLEC4AQ9UMR7 237 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 OAZ3Q9UMX2 235 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 FABP12A6NFH5 140 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ADAMTS3O15072 1205 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SNX4O95219 450 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 VARSP26640 1264 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 RAB2AP61019 212 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 VBP1P61758 197 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 FRMD7Q6ZUT3 714 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 UTS2BQ765I0 119 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 GDAP2Q9NXN4 497 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SPATA7Q9P0W8 599 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PRODHO43272 600 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CBX5P45973 191 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SIRPB2Q5JXA9 342 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CDCA2Q69YH5 1023 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ZCCHC12Q6PEW1 402 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 MTERF1Q99551 399 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 FLRT1Q9NZU1 646 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 DKK3Q9UBP4 350 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 UPB1Q9UBR1 384 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TMED5Q9Y3A6 229 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PDCD5O14737 125 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 NIPSNAP2O75323 286 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PRAMEF12O95522 483 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SERPINA3P01011 423 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 HMGN1P05114 100 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CBSLP0DN79 551 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 IL7RP16871 459 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CBSP35520 551 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PITPNAQ00169 270 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SCARB2Q14108 478 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TIGD6Q17RP2 521 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ZC3H3Q8IXZ2 948 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 GRPEL2Q8TAA5 225 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SUSD3Q96L08 255 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 TUBGCP5Q96RT8 1024 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 POLR2J2Q9GZM3 115 aaKnown RBP12.23□□□□□ -0.45
COL11A1-210ENST00000512756 ZNF541Q9H0D2 1346 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 SLC17A6Q9P2U8 582 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 PCDHGB7Q9Y5F8 929 aa12.23□□□□□ -0.45
COL11A1-210ENST00000512756 CLIC1O00299 241 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ENPP3O14638 875 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 AHSGP02765 367 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 CD36P16671 472 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 RHDQ02161 417 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 MXD1Q05195 221 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 SPIN4Q56A73 249 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 FBXL22Q6P050 247 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 COMMD4Q9H0A8 199 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 SUV39H2Q9H5I1 410 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 PTBP2Q9UKA9 531 aaKnown RBP12.22□□□□□ -0.45
COL11A1-210ENST00000512756 OR51F1A6NGY5 319 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 LRRC72A6NJI9 287 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 HAS3O00219 553 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 SIX3O95343 332 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-210ENST00000512756 DNASE1L1P49184 302 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 GALNT2Q10471 571 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 NEK7Q8TDX7 302 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 EFHD2Q96C19 240 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-210ENST00000512756 LMLNQ96KR4 655 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 LPIN3Q9BQK8 851 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ZBTB26Q9HCK0 441 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 RBPJLQ9UBG7 517 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ZDHHC2Q9UIJ5 367 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 PPM1HQ9ULR3 514 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 TSPAN9O75954 239 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 NPPAP01160 153 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ALPPP05187 535 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 CFHP08603 1231 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 ERVK-21P61565 698 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 NPTX1Q15818 432 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 AMZ2Q86W34 360 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 NUDT13Q86X67 352 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 TAMM41Q96BW9 452 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 RPL10LQ96L21 214 aaKnown RBP12.22□□□□□ -0.45
COL11A1-210ENST00000512756 TBC1D17Q9HA65 648 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
COL11A1-210ENST00000512756 B3GALT2O43825 422 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms