RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 TPSAB1Q15661 275 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 CPZQ66K79 652 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 PTRHD1Q6GMV3 140 aaKnown RBP21.31■■□□□ 1
PACRGL-220ENST00000508952 LRRC8BQ6P9F7 803 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 FAM20CQ8IXL6 584 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 SEC14L1Q92503 715 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 N4BP2L2Q92802 583 aaPredicted RBP21.31■■□□□ 1
PACRGL-220ENST00000508952 MFSD3Q96ES6 412 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 TCTN2Q96GX1 697 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 KIFC1Q9BW19 673 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 P2RY12Q9H244 342 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 HOMER3Q9NSC5 361 aa21.31■■□□□ 1
PACRGL-220ENST00000508952 SPENQ96T58 3664 aaKnown RBP21.3■■□□□ 1
PACRGL-220ENST00000508952 GOLGA8KD6RF30 607 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 GOLGA8TH3BQL2 631 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 AP3B1O00203 1094 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 NRDCO43847 1150 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 KDM1AO60341 852 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 NDUFS3O75489 264 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 VAPBO95292 243 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 CAPN1P07384 714 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 CTSBP07858 339 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 GABRA4P48169 554 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 RAB28P51157 221 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 CHAF1BQ13112 559 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 KCNJ11Q14654 390 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 TMED2Q15363 201 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 KYNUQ16719 465 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 TTC27Q6P3X3 843 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 APLFQ8IW19 511 aaPredicted RBP21.3■■□□□ 1
PACRGL-220ENST00000508952 GPR135Q8IZ08 494 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 C2orf73Q8N5S3 287 aaPredicted RBP21.3■■□□□ 1
PACRGL-220ENST00000508952 LINC01555Q8NAE3 123 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 MS4A14Q96JA4 679 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 IL17FQ96PD4 163 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 SPRTNQ9H040 489 aaPredicted RBP21.3■■□□□ 1
PACRGL-220ENST00000508952 GNPTGQ9UJJ9 305 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 ANAPC2Q9UJX6 822 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 SNX7Q9UNH6 387 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 KLHL20Q9Y2M5 609 aa21.3■■□□□ 1
PACRGL-220ENST00000508952 TNRC6AQ8NDV7 1962 aaKnown RBP21.3■■□□□ 1
PACRGL-220ENST00000508952 MED13Q9UHV7 2174 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 AVILO75366 819 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 OR2B3O76000 313 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 SLCO2B1O94956 709 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 RAB40ALP0C0E4 278 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 EIF3BP55884 814 aaKnown RBP21.29■■□□□ 1
PACRGL-220ENST00000508952 CDK16Q00536 496 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 GPS1Q13098 491 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 GRB7Q14451 532 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 KIR2DS3Q14952 304 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 SLC5A12Q1EHB4 618 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 UNC5DQ6UXZ4 953 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 TAX1BP1Q86VP1 789 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 DCUN1D3Q8IWE4 304 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 MPP5Q8N3R9 675 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 THAP4Q8WY91 577 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 MENTQ9BUN1 341 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 NLNQ9BYT8 704 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 MRM3Q9HC36 420 aaKnown RBP21.29■■□□□ 1
PACRGL-220ENST00000508952 TCFL5Q9UL49 500 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 SOX13Q9UN79 622 aa21.29■■□□□ 1
PACRGL-220ENST00000508952 ARGFXA6NJG6 315 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 H3BMH7 237 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 RPN2P04844 631 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 ATXN8OSP0DMR3 200 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 RPS3P23396 243 aaKnown RBP eCLIP21.28■■□□□ 1
PACRGL-220ENST00000508952 CASRP41180 1078 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 CTSL3PQ5NE16 218 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 ANKRD22Q5VYY1 191 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 ZNF385CQ66K41 422 aaPredicted RBP21.28■■□□□ 1
PACRGL-220ENST00000508952 TCTN3Q6NUS6 607 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 ADAMTS17Q8TE56 1095 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 PANX3Q96QZ0 392 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 RUVBL2Q9Y230 463 aaKnown RBP21.28■■□□□ 1
PACRGL-220ENST00000508952 FLNCQ14315 2725 aa21.28■■□□□ 1
PACRGL-220ENST00000508952 KRT87PA6NCN2 255 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 KRT14P02533 472 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 PDGFAP04085 211 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 HBQ1P09105 142 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 CBSLP0DN79 551 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 CD9P21926 228 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 CBSP35520 551 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 PTGIRP43119 386 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 NCF4Q15080 339 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 C1orf189Q5VU69 101 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 ASB18Q6ZVZ8 466 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 LRRC6Q86X45 466 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 RASGEF1CQ8N431 466 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 GSDMBQ8TAX9 411 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 SKA2Q8WVK7 121 aaPredicted RBP21.27■■□□□ 1
PACRGL-220ENST00000508952 TRIM56Q9BRZ2 755 aaKnown RBP21.27■■□□□ 1
PACRGL-220ENST00000508952 CHRNA10Q9GZZ6 450 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 TSR3Q9UJK0 312 aaKnown RBP21.27■■□□□ 1
PACRGL-220ENST00000508952 NFS1Q9Y697 457 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 CCDC88CQ9P219 2028 aa21.27■■□□□ 1
PACRGL-220ENST00000508952 NBASA2RRP1 2371 aa21.26■□□□□ 0.99
PACRGL-220ENST00000508952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.26■□□□□ 0.99
PACRGL-220ENST00000508952 TMEM63AO94886 807 aa21.26■□□□□ 0.99
PACRGL-220ENST00000508952 MAGP20916 626 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms