RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NEK8Q86SG6 692 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CDR2LQ86X02 465 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CPOQ8IVL8 374 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CRYBG2Q8N1P7 616 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 METTL25Q8N6Q8 603 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 Q8N9G6 341 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SNX31Q8N9S9 440 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RSC1A1Q92681 617 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PSKH2Q96QS6 385 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 LRFN3Q9BTN0 628 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CADM1Q9BY67 442 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 OSBPL6Q9BZF3 934 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SEMA6BQ9H3T3 888 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PLGRKTQ9HBL7 147 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SLC40A1Q9NP59 571 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 XPR1Q9UBH6 696 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF112Q9UJU3 913 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 HCN2Q9UL51 889 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 UBE4BO95155 1302 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ISPDA4D126 451 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 GRXCR1A8MXD5 290 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SOX1O00570 391 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF254O75437 659 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SRP72O76094 671 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 MOCS2O96007 188 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 B3GALT4O96024 378 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 IFNA14P01570 189 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PRR35P0CG20 571 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SP9P0CG40 484 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF865P0CJ78 1059 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RD3LP0DJH9 198 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SKILP12757 684 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TYRP14679 529 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PPP3CBP16298 524 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PPP2R1BP30154 601 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CHRNA5P30532 468 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SLC11A2P49281 568 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 LILRA4P59901 499 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SUMO2P61956 95 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 GRIK4Q16099 956 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PLEKHN1Q494U1 663 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ANO7Q6IWH7 933 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CD300LDQ6UXZ3 194 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 KCTD20Q7Z5Y7 419 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 HORMAD1Q86X24 394 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CPXM2Q8N436 756 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 POU5F2Q8N7G0 328 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TDRD5Q8NAT2 981 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SPPL3Q8TCT6 385 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 BPIFB1Q8TDL5 484 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CD300LFQ8TDQ1 290 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ATOH1Q92858 354 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 C11orf54Q9H0W9 315 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TRPV4Q9HBA0 871 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SGK2Q9HBY8 427 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 HOXC10Q9NYD6 342 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 VPS54Q9P1Q0 977 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 FTSJ1Q9UET6 329 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RAP2CQ9Y3L5 183 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PCDHGB1Q9Y5G3 927 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RPTORQ8N122 1335 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 XKRY2A2RUG3 117 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TTLL8A6PVC2 850 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 FAM58BPP0C7Q3 252 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PSMA2P25787 234 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PTPN3P26045 913 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 MAGEA6P43360 314 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ALDH1A3P47895 512 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RRADP55042 308 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 MFAP3P55082 362 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 HIST2H2ACQ16777 129 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SLC39A12Q504Y0 691 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF311Q5JNZ3 666 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TRIM65Q6PJ69 517 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 MOB3CQ70IA8 216 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SYT9Q86SS6 491 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ADGRF4Q8IZF3 695 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SYTL5Q8TDW5 730 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TFAP2CQ92754 450 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CERS2Q96G23 380 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TRIB1Q96RU8 372 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PCGF1Q9BSM1 259 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 HINT2Q9BX68 163 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ASPNQ9BXN1 380 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 PCDHA12Q9UN75 941 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RPP40O75818 363 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ACSL3O95573 720 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 RAB3DO95716 219 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 HLA-DRAP01903 254 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 ASNSP08243 561 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 OR52Z1P0C646 297 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 MMP9P14780 707 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 SLC1A2P43004 574 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 KCNQ1P51787 676 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CDH13P55290 713 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 CYP4F2P78329 520 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 RBPJQ06330 500 aa3.84□□□□□ -1.8
NEDD4-209ENST00000508871 TRAP1Q12931 704 aaKnown RBP3.84□□□□□ -1.8
NEDD4-209ENST00000508871 GCNT6Q5T4J0 391 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms