RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ERVW-1Q9UQF0 538 aa10.79□□□□□ -0.68
SH3RF1-203ENST00000508685 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 TRBV5-4A0A0C4DH59 114 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 TPST1O60507 370 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 DNAJB5O75953 348 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 PRSS23O95084 383 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 GNAO1P09471 354 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 RAP2AP10114 183 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF7P17097 686 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ZFP36L2P47974 494 aaKnown RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 AGTR2P50052 363 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ALDH3A2P51648 485 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 HK3P52790 923 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 UFM1P61960 85 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 MAD2L1Q13257 205 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 POM121L1PQ3SYA9 428 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 PAGE3Q5JUK9 113 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 RBM48Q5RL73 367 aaKnown RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 TTC23Q5W5X9 447 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 PTRHD1Q6GMV3 140 aaKnown RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 GLYATQ6IB77 296 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 IFNEQ86WN2 208 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 RIMKLAQ8IXN7 391 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 KIAA2013Q8IYS2 634 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 CELF5Q8N6W0 485 aaKnown RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 MAGEE2Q8TD90 523 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ESAMQ96AP7 390 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 TIFAQ96CG3 184 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 OTUB2Q96DC9 234 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 AURKBQ96GD4 344 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 SH3GL1Q99961 368 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 BRD9Q9H8M2 597 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 GMPR2Q9P2T1 348 aaKnown RBP10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 B4GALT6Q9UBX8 382 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 GIMAP2Q9UG22 337 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 CD84Q9UIB8 345 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 CRLS1Q9UJA2 301 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ASB1Q9Y576 335 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 TIMM22Q9Y584 194 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 PTGDR2Q9Y5Y4 395 aa10.78□□□□□ -0.68
SH3RF1-203ENST00000508685 ANKRD12Q6UB98 2062 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CBFA2T3O75081 653 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 LEFTY1O75610 366 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CPNE6O95741 557 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CTSLP07711 333 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 ANXA6P08133 673 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 ADH5P11766 374 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 TCF3P15923 654 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 ERVK-21P61565 698 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CHRNB3Q05901 458 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 PWP1Q13610 501 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 PCBP2Q15366 365 aaKnown RBP eCLIP10.77□□□□□ -0.681e-6■■■■■ 51.6
SH3RF1-203ENST00000508685 ATP13A5Q4VNC0 1218 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 RABL3Q5HYI8 236 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 FAM78AQ5JUQ0 283 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 GRAMD4Q6IC98 578 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 KLHL35Q6PF15 583 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF773Q6PK81 442 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 GDPD4Q6W3E5 623 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 RNF165Q6ZSG1 346 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 KIAA0907Q7Z7F0 614 aaPredicted RBP10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 NPAS3Q8IXF0 933 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 RBFAQ8N0V3 343 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 NXPE1Q8N323 547 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 DEFB123Q8N688 67 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 FNDC5Q8NAU1 212 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 OR52E4Q8NGH9 312 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 DNAJB8Q8NHS0 232 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 PROKR1Q8TCW9 393 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 VPS33AQ96AX1 596 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 SDCCAG3Q96C92 435 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 VPS50Q96JG6 964 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CCDC115Q96NT0 180 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 RPF2Q9H7B2 306 aaKnown RBP10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 GORASP2Q9H8Y8 452 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 POLR1BQ9H9Y6 1135 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 FAIMQ9NVQ4 179 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 CD274Q9NZQ7 290 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 EBF1Q9UH73 591 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 DPP7Q9UHL4 492 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 PPIL1Q9Y3C6 166 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 PCDHB1Q9Y5F3 818 aa10.77□□□□□ -0.68
SH3RF1-203ENST00000508685 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 TMEM265A0A087WTH1 108 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 ASPDHA6ND91 283 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 SEC24DO94855 1032 aaPredicted RBP10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 TRIM16O95361 564 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 S100BP04271 92 aaPredicted RBP10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 C1SP09871 688 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 ZNF12P17014 697 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 RECQLP46063 649 aaPredicted RBP10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 DGKGP49619 791 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 GALK1P51570 392 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 TMED1Q13445 227 aa10.77□□□□□ -0.69
SH3RF1-203ENST00000508685 TOP3AQ13472 1001 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms