RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SIGLEC12Q96PQ1 595 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PITPNM3Q9BZ71 974 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 XKR8Q9H6D3 395 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 PCDH9Q9HC56 1237 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 RMND1Q9NWS8 449 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 TEKT2Q9UIF3 430 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 C3orf18Q9UK00 162 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 NXT1Q9UKK6 140 aaKnown RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 RCOR1Q9UKL0 485 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 SHOC2Q9UQ13 582 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
VCAN-207ENST00000507162 ANK3Q12955 4377 aaKnown RBP6.89□□□□□ -1.31
VCAN-207ENST00000507162 A0A1B0GX78 115 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 SPRY1O43609 319 aaPredicted RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 SMPD2O60906 423 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 SIX3O95343 332 aaPredicted RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 LSM8O95777 96 aaKnown RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 PIRTP0C851 137 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 COX6A1P12074 109 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 CD46P15529 392 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 BMP7P18075 431 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 MX2P20592 715 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 PON1P27169 355 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 ARSFP54793 590 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 NOMO3P69849 1222 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 KRT85P78386 507 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 OCA2Q04671 838 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 IHHQ14623 411 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 MAPKAPK3Q16644 382 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 QPCTQ16769 361 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 C10orf62Q5T681 223 aaPredicted RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 RIPOR1Q6ZS17 1223 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 ARHGEF18Q6ZSZ5 1173 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 LAPTM4BQ86VI4 370 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 PAQR7Q86WK9 346 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 TMTC1Q8IUR5 882 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 MCATQ8IVS2 390 aaKnown RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 FAM98AQ8NCA5 519 aaKnown RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 ACVR1CQ8NER5 493 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 STT3BQ8TCJ2 826 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 BRSK1Q8TDC3 778 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 RBM41Q96IZ5 413 aaKnown RBP6.88□□□□□ -1.31
VCAN-207ENST00000507162 FRMD6Q96NE9 622 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 LYSMD1Q96S90 227 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 TUBGCP2Q9BSJ2 902 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 CNPY3Q9BT09 278 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 SLC6A16Q9GZN6 736 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 VPS16Q9H269 839 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 SLC26A1Q9H2B4 701 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 PLEKHF2Q9H8W4 249 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 PCSK1NQ9UHG2 260 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 GNPTGQ9UJJ9 305 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 CFAP45Q9UL16 551 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 TMPRSS11EQ9UL52 423 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 CBLCQ9ULV8 474 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 AP4E1Q9UPM8 1137 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 PLCL2Q9UPR0 1127 aa6.88□□□□□ -1.31
VCAN-207ENST00000507162 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ABCA1O95477 2261 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ANKRD62A6NC57 917 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ASPDHA6ND91 283 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 VSTM2BA6NLU5 285 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ANKRD66B4E2M5 251 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 RASGRF2O14827 1237 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 MAFKO60675 156 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 PDE9AO76083 593 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 GNA14O95837 355 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ZGLP1P0C6A0 271 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 SLC35G4P0C7Q5 338 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ZNF24P17028 368 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 CA4P22748 312 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 AMPD1P23109 780 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 CD96P40200 585 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ZFP36L2P47974 494 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 GABRA4P48169 554 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 EMP2P54851 167 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 AIF1P55008 147 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 OC90Q02509 493 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 PRKG2Q13237 762 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 TUBA3CQ13748 450 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 FASTKQ14296 549 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 OR1C1Q15619 314 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ATP13A5Q4VNC0 1218 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 PDPK2PQ6A1A2 396 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 TUBA3EQ6PEY2 450 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 SPESP1Q6UW49 350 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 THSD4Q6ZMP0 1018 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 CAPN12Q6ZSI9 719 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms