RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 FANCFQ9NPI8 374 aa4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 WSB2Q9NYS7 404 aaPredicted RBP4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 VPS54Q9P1Q0 977 aa4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 APPL1Q9UKG1 709 aa4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 KCNJ14Q9UNX9 436 aa4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 TRIP12Q14669 1992 aaPredicted RBP4.27□□□□□ -1.73
CALCOCO2-208ENST00000506971 NRXN2Q9P2S2 1712 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ATP8B3O60423 1300 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 EVPLQ92817 2033 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CTAGE9A4FU28 777 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 USP27XA6NNY8 438 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 INAFM1C9JVW0 142 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PRKAB2O43741 272 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 KRT86O43790 486 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 TOM1O60784 492 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 BCAS2O75934 225 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 DDHD2O94830 711 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 DDAH2O95865 285 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CYP3A4P08684 503 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GCFC2P16383 781 aaKnown RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GSTM2P28161 218 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 TNFSF8P32971 234 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CYLC1P35663 651 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GYG1P46976 350 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 NOVP48745 357 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 LUMP51884 338 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CAPZA1P52907 286 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PMS2P54278 862 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ADPRHP54922 357 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GNG11P61952 73 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 LRRC63Q05C16 580 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 COX10Q12887 443 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GRAPQ13588 217 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GSTA3Q16772 222 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ASPRV1Q53RT3 343 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 FSCBQ5H9T9 825 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 NADSYN1Q6IA69 706 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 TMEM81Q6P7N7 255 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 TRIM65Q6PJ69 517 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 KIAA1324Q6UXG2 1013 aaKnown RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 SLC46A3Q7Z3Q1 461 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 DSG4Q86SJ6 1040 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CEP57Q86XR8 500 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 MAML2Q8IZL2 1156 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 HORMAD2Q8N7B1 307 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GRAPLQ8TC17 118 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ELP5Q8TE02 316 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 RAB40AQ8WXH6 277 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 WDFY2Q96P53 400 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 NPAS1Q99742 590 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 FERMT1Q9BQL6 677 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 MGME1Q9BQP7 344 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 KIFC3Q9BVG8 833 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 HDHD5Q9BXW7 423 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 TRIM31Q9BZY9 425 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 B3GNT4Q9C0J1 378 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CLPBQ9H078 707 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ZMYND12Q9H0C1 365 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CDT1Q9H211 546 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 ABCG8Q9H221 673 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 OSGEPL1Q9H4B0 414 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 EPHX3Q9H6B9 360 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 HAUS4Q9H6D7 363 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 POLR1BQ9H9Y6 1135 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PDE11AQ9HCR9 933 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PNRC2Q9NPJ4 139 aaKnown RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 BARHL2Q9NY43 387 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PSD3Q9NYI0 1048 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 PLEKHB1Q9UF11 243 aaPredicted RBP4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 FBXL17Q9UF56 701 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 CDH7Q9ULB5 785 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 AURKCQ9UQB9 309 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 MYH4Q9Y623 1939 aa4.26□□□□□ -1.73
CALCOCO2-208ENST00000506971 GAKO14976 1311 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 COL2A1P02458 1487 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CYP3A7-CYP3A51PA0A087WV96 503 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PVALEFA0A1B0GWK0 134 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 A0A1W2PRG0 241 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 CLRN2A0PK11 232 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TARSL2A2RTX5 802 aaKnown RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 IFITM10A6NMD0 228 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ENO4A6NNW6 628 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 ACOT8O14734 319 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PER2O15055 1255 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 MCF2LO15068 1137 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PAPSS1O43252 624 aaPredicted RBP4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 SMPD2O60906 423 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 BBOX1O75936 387 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 TRIM16O95361 564 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 PLEKHA8P1O95397 391 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 GNA14O95837 355 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 LCKP06239 509 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 HOXC6P09630 235 aa4.25□□□□□ -1.73
CALCOCO2-208ENST00000506971 OR52Z1P0C646 297 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms