RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 HNRNPRO43390 633 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 EPORP19235 508 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 IL10P22301 178 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 IL12AP29459 219 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 HNF4AP41235 474 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC6A11P48066 632 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 GRIN2CQ14957 1233 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 RAB30Q15771 203 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 MTX3Q5HYI7 312 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 GET4Q7L5D6 327 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 YAF2Q8IY57 180 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 FAM156AQ8NDB6 213 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 GATA6Q92908 595 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 ARRDC3Q96B67 414 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 KCTD14Q9BQ13 255 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 OSBPL6Q9BZF3 934 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 COPS7BQ9H9Q2 264 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 CCM2LQ9NUG4 571 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 THAP10Q9P2Z0 257 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 GPR34Q9UPC5 381 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 KIAA1549LQ6ZVL6 1849 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 TSPAN6O43657 245 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 SEC22BO75396 215 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 KCNH1O95259 989 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 HOXB6P17509 224 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 FCARP24071 287 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 PSMA4P25789 261 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 MSX2P35548 267 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 RUNX3Q13761 415 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 SFT2D3Q587I9 215 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 MBOAT1Q6ZNC8 495 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 TMEM102Q8N9M5 508 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 CSGALNACT1Q8TDX6 532 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC13A3Q8WWT9 602 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 VPS33AQ96AX1 596 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 SLC39A3Q9BRY0 314 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 MTG2Q9H4K7 406 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 ACTL8Q9H568 366 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 YY1AP1Q9H869 796 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 IL1RL2Q9HB29 575 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 MAGEL2Q9UJ55 1249 aa16.84■□□□□ 0.29
TRAPPC11-204ENST00000505676 KLHL33A6NCF5 533 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 OR2AG2A6NM03 316 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 FFAR3O14843 346 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 GPR42O15529 346 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 DENRO43583 198 aaKnown RBP16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 PRMT3O60678 531 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 MTX2O75431 263 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 RECQL5O94762 991 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 PIM1P11309 404 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 PAGE3Q5JUK9 113 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 FRG2Q64ET8 278 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 TMEM220Q6QAJ8 160 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 STARD8Q92502 1023 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 SLC45A3Q96JT2 553 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 FRG2BQ96QU4 278 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 FAM129BQ96TA1 746 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 PKP2Q99959 881 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 CLMPQ9H6B4 373 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 TRIM39Q9HCM9 518 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 PDP2Q9P2J9 529 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 YBX2Q9Y2T7 364 aaKnown RBP16.83■□□□□ 0.28
TRAPPC11-204ENST00000505676 TBC1D3BA6NDS4 549 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 SPINT1O43278 529 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 LZTS3O60299 673 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 C6P13671 934 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 GRIA2P42262 883 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 GPR1P46091 355 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 GSK3BP49841 420 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CLDN8P56748 225 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 KIAA0040Q15053 153 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 DPY19L1Q2PZI1 675 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 C9orf50Q5SZB4 431 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 FAM219BQ5XKK7 198 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 NANOGP8Q6NSW7 305 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CGREF1Q99674 301 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 ACPTQ9BZG2 426 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 DPEP2Q9H4A9 486 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 NANOGQ9H9S0 305 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 DHRS12A0PJE2 317 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 ARHGEF33A8MVX0 844 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CLGNO14967 610 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 AP1G1O43747 822 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 AQP4P55087 323 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 PFN3P60673 137 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 LIPEQ05469 1076 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CPSF6Q16630 551 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZNF658BQ4V348 819 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 USP39Q53GS9 565 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 NEK5Q6P3R8 708 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 PACRGLQ8N7B6 248 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 OR56A3Q8NH54 315 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 FCRL1Q96LA6 429 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms