RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FOLH1Q04609 750 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 PDK3Q15120 406 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 ADCK1Q86TW2 530 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 LRTOMTQ8WZ04 291 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
TCOF1-207ENST00000504761 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 RAD21L1Q9H4I0 556 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 FZD3Q9NPG1 666 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 RPS6KB2Q9UBS0 482 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 MAPRE3Q9UPY8 281 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 MYRFQ9Y2G1 1151 aa13.78□□□□□ -0.2
TCOF1-207ENST00000504761 URADA6NGE7 173 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 TBX10O75333 385 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 BMP10O95393 424 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 F11P03951 625 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 MYCLP1P12525 358 aaPredicted RBP13.77□□□□□ -0.2
TCOF1-207ENST00000504761 AKT2P31751 481 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 C21orf59P57076 290 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 LRRC32Q14392 662 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 SPRED3Q2MJR0 410 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 EMC10Q5UCC4 262 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 HLA-DQA1Q5Y7H0 255 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 IRGCQ6NXR0 463 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 HTR3DQ70Z44 454 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 MIPEPQ99797 713 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 AP3M1Q9Y2T2 418 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 ZNF780BQ9Y6R6 833 aa13.77□□□□□ -0.2
TCOF1-207ENST00000504761 SUV39H1O43463 412 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 LATO43561 262 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 TNFAIP8O95379 198 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PRAMEF12O95522 483 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 GSRP00390 522 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PRPS2P11908 318 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PRDX6P30041 224 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.21
TCOF1-207ENST00000504761 GRB7Q14451 532 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 PRAMEF13Q5VWM6 474 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 FAM46DQ8NEK8 389 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 TMEM74Q96NL1 305 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 XKR8Q9H6D3 395 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 RETREG1Q9H6L5 497 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 RUVBL1Q9Y265 456 aaKnown RBP13.77□□□□□ -0.21
TCOF1-207ENST00000504761 SDHDO14521 159 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 ATP6V1C1P21283 382 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 KRT20P35900 424 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 C1QTNF8P60827 252 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 SKP1P63208 163 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 ARMCX6Q7L4S7 300 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 OFCC1Q8IZS5 231 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 SLC43A3Q8NBI5 491 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 BPIFB6Q8NFQ5 453 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 MAPK15Q8TD08 544 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 IL17FQ96PD4 163 aa13.77□□□□□ -0.21
TCOF1-207ENST00000504761 MRPS17Q9Y2R5 130 aaKnown RBP13.77□□□□□ -0.21
TCOF1-207ENST00000504761 HNRNPCL2B2RXH8 293 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PCDH7O60245 1069 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 AOC1P19801 751 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ALAS2P22557 587 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 FDXRP22570 491 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ARCN1P48444 511 aaKnown RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 HNMTP50135 292 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 UBE3AQ05086 875 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 GRIN2CQ14957 1233 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 VANGL1Q8TAA9 524 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 WBP2Q969T9 261 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PTERQ96BW5 349 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DCUN1D5Q9BTE7 237 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 CD244Q9BZW8 370 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ITM2CQ9NQX7 267 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ANGPT4Q9Y264 503 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 OR10H1Q9Y4A9 318 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 MID1O15344 667 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 OAS1P00973 400 aaKnown RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 CMPK1P30085 196 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DGCR6Q14129 220 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PTGR1Q14914 329 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 RABL3Q5HYI8 236 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 OR4F3Q6IEY1 312 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PDE12Q6L8Q7 609 aaKnown RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DEF8Q6ZN54 512 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 OR4E2Q8NGC2 313 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 WFDC5Q8TCV5 224 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PHF10Q8WUB8 498 aaKnown RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 CWH43Q9H720 699 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ZBTB26Q9HCK0 441 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 G3V2L1 256 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 FAM20BO75063 409 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 ABLIM3O94929 683 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 C6P13671 934 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SLC6A11P48066 632 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SYVN1Q86TM6 617 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 PRSS58Q8IYP2 241 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms