RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PER2O15055 1255 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PCDH7O60245 1069 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HLA-DRAP01903 254 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KRT6AP02538 564 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 OPN1LWP04000 364 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 KRT6BP04259 564 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 APOA4P06727 396 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HEXBP07686 556 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GALTP07902 379 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RETP07949 1114 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CHRM4P08173 479 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CLTAP09496 248 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GPR89BP0CG08 455 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CALM1P0DP23 149 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CALM2P0DP24 149 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CALM3P0DP25 149 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HLA-DOBP13765 273 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC2A4P14672 509 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HLA-DPA1P20036 260 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PSMA2P25787 234 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NFKBIAP25963 317 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 MAPK3P27361 379 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 EEF1DP29692 281 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ADSSP30520 456 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 MSH2P43246 934 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 HOXA1P49639 335 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 BLKP51451 505 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CLCNKAP51800 687 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ARHGDIBP52566 201 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PRKAA2P54646 552 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NR1H2P55055 460 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC26A5P58743 744 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 VBP1P61758 197 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TSPAN5P62079 268 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RIPPLY1Q0D2K3 151 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TFCP2Q12800 502 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CDC16Q13042 620 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DRP2Q13474 957 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 COTL1Q14019 142 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CASP8Q14790 479 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NAA25Q14CX7 972 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NCF4Q15080 339 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TRADDQ15628 312 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 NFIL3Q16649 462 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 WHAMMP3Q1A5X7 153 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ALG11Q2TAA5 492 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LETM2Q2VYF4 491 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LRIT3Q3SXY7 679 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CMPK2Q5EBM0 449 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CCNYL2Q5T2Q4 361 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 C12orf60Q5U649 245 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SPECC1LQ69YQ0 1117 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC35E4Q6ICL7 350 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DENND1BQ6P3S1 775 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TTC23LQ6PF05 361 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 PAPD4Q6PIY7 484 aaKnown RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SARM1Q6SZW1 724 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LCTLQ6UWM7 567 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 OLFM4Q6UX06 510 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GFRALQ6UXV0 394 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CEACAM20Q6UY09 585 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LDHAL6AQ6ZMR3 332 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ZNF704Q6ZNC4 412 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 MFSD6Q6ZSS7 791 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CCDC121Q6ZUS5 278 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 USP50Q70EL3 339 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 GALNTL5Q7Z4T8 443 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LUZP1Q86V48 1076 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 P2RY8Q86VZ1 359 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DNAAF5Q86Y56 855 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CD302Q8IX05 232 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ST13P4Q8IZP2 240 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 FAM9CQ8IZT9 166 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ARHGAP18Q8N392 663 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CEP112Q8N8E3 955 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ATAD1Q8NBU5 361 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SCCPDHQ8NBX0 429 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 AGBL3Q8NEM8 1001 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 TRPV1Q8NER1 839 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 IPMKQ8NFU5 416 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 OR56B2PQ8NGI1 322 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 OR10V1Q8NGI7 309 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 LILRB4Q8NHJ6 448 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 BBS10Q8TAM1 723 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC22A8Q8TCC7 542 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ATP8B4Q8TF62 1192 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 DDI1Q8WTU0 396 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RAPGEF5Q92565 580 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CIDECQ96AQ7 238 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 OPTNQ96CV9 577 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SPDL1Q96EA4 605 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ALG14Q96F25 216 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 SLC47A1Q96FL8 570 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ABHD8Q96I13 439 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ZBED3Q96IU2 234 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 RADILQ96JH8 1075 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 CCDC42Q96M95 316 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 ZNF560Q96MR9 790 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 C17orf77Q96MU5 243 aa1.96□□□□□ -2.1
HMGB3P17-201ENST00000504195 JAKMIP1Q96N16 626 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms