RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TTC7AQ9ULT0 858 aaPredicted RBP18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 CDYLQ9Y232 598 aa18.77■□□□□ 0.6
UBE2D3-215ENST00000503418 C9J4A7 227 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 AP3B1O00203 1094 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 NRDCO43847 1150 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 GPC4O75487 556 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 NDUFS3O75489 264 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 RPN2P04844 631 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 HBQ1P09105 142 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 AGXTP21549 392 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 MGAT1P26572 445 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 AOAHP28039 575 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 PEBP1P30086 187 aaKnown RBP18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 PKLRP30613 574 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 PTGIRP43119 386 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 NPY2RP49146 381 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 RAB28P51157 221 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 CCZ1BP86790 482 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 CCZ1P86791 482 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 KIR2DS3Q14952 304 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 TRIP13Q15645 432 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 TAX1BP1Q86VP1 789 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 DCUN1D3Q8IWE4 304 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 FAM20CQ8IXL6 584 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 C2orf73Q8N5S3 287 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 FLVCR1-AS1Q8TAF5 88 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 GSDMBQ8TAX9 411 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 TREX1Q9NSU2 369 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 SYBUQ9NX95 663 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 GNPTGQ9UJJ9 305 aa18.76■□□□□ 0.59
UBE2D3-215ENST00000503418 FLNBO75369 2602 aaKnown RBP18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 FER1L5A0AVI2 2057 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 MED13Q9UHV7 2174 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 HCRTR1O43613 425 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 CAPN1P07384 714 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 VPS41P49754 854 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 CCL11P51671 97 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 IGFBP7Q16270 282 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 KYNUQ16719 465 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 SLC5A12Q1EHB4 618 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 C1orf189Q5VU69 101 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 CES3Q6UWW8 571 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 LMNTD1Q8N9Z9 388 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 SKA2Q8WVK7 121 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 MFSD3Q96ES6 412 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 IL17FQ96PD4 163 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 PANX3Q96QZ0 392 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 DPH2Q9BQC3 489 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 SPRTNQ9H040 489 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 ING2Q9H160 280 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 HOMER3Q9NSC5 361 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
UBE2D3-215ENST00000503418 SETXQ7Z333 2677 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 TCRBV7S3A2A0A539 114 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 PDGFAP04085 211 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 TPSB2P20231 275 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 EIF3BP55884 814 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 NCF4Q15080 339 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 TPSAB1Q15661 275 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 LRRC8BQ6P9F7 803 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 UNC5DQ6UXZ4 953 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 MPP5Q8N3R9 675 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 ZNF655Q8N720 491 aaPredicted RBP18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 PRELID2Q8N945 189 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 ADAMTS17Q8TE56 1095 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 SLC25A23Q9BV35 468 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 P2RY12Q9H244 342 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 KLHL20Q9Y2M5 609 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 AP1M2Q9Y6Q5 423 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 CCDC88CQ9P219 2028 aa18.74■□□□□ 0.59
UBE2D3-215ENST00000503418 GOLGA8KD6RF30 607 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 GOLGA8TH3BQL2 631 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 ZSCAN9O15535 394 aaPredicted RBP18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 TMEM63AO94886 807 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 SLCO2B1O94956 709 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 VAPBO95292 243 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 CTSBP07858 339 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 CBSLP0DN79 551 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 MAGP20916 626 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 CBSP35520 551 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 GABRA4P48169 554 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 PGDP52209 483 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 CDK16Q00536 496 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 MLIPQ5VWP3 458 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 ZNF385CQ66K41 422 aaPredicted RBP18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 OTOAQ7RTW8 1153 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 LINC01555Q8NAE3 123 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 KIFC1Q9BW19 673 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 CHRNA10Q9GZZ6 450 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 MRM3Q9HC36 420 aaKnown RBP18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 TXLNGQ9NUQ3 528 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 DHCR7Q9UBM7 475 aaKnown RBP18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 GPN3Q9UHW5 284 aaPredicted RBP18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 SLC39A10Q9ULF5 831 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 PADI2Q9Y2J8 665 aa18.73■□□□□ 0.59
UBE2D3-215ENST00000503418 H3BMH7 237 aa18.72■□□□□ 0.59
UBE2D3-215ENST00000503418 KPNA5O15131 536 aa18.72■□□□□ 0.59
UBE2D3-215ENST00000503418 CD9P21926 228 aa18.72■□□□□ 0.59
UBE2D3-215ENST00000503418 RPS3P23396 243 aaKnown RBP eCLIP18.72■□□□□ 0.595e-12■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms