RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CYLC1P35663 651 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PPARGP37231 505 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ATP5OP48047 213 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 LMAN1P49257 510 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 RAB28P51157 221 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 RWDD2BP57060 319 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 EIF3EP60228 445 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 RELAQ04206 551 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 SPA17Q15506 151 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 INAQ16352 499 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 KYNUQ16719 465 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 EIF2S3LQ2VIR3 472 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 NKAIN1Q4KMZ8 207 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 DNAJC21Q5F1R6 531 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PRAMEF17Q5VTA0 474 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ARMC3Q5W041 872 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 KAZNQ674X7 775 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 UNC5DQ6UXZ4 953 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 NLRP9Q7RTR0 991 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 OVCH1Q7RTY7 1134 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PPP1R32Q7Z5V6 425 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 HOOK3Q86VS8 718 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC22A15Q8IZD6 547 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ZADH2Q8N4Q0 377 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TC2NQ8N9U0 490 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PHC3Q8NDX5 983 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ASZ1Q8WWH4 475 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 KRT35Q92764 455 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 LMF1Q96S06 567 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TTC1Q99614 292 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 WDR77Q9BQA1 342 aaPredicted RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TRIM56Q9BRZ2 755 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 NDC1Q9BTX1 674 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 CARD6Q9BX69 1037 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 TSSK1BQ9BXA7 367 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 RAB11FIP5Q9BXF6 653 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 INTS7Q9NVH2 962 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ASF1BQ9NVP2 202 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 EURLQ9NYK6 297 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 NDOR1Q9UHB4 597 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 ASF1AQ9Y294 204 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PTRH2Q9Y3E5 179 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 HYOU1Q9Y4L1 999 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 PCDHA13Q9Y5I0 950 aa5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
LSM3P4-201ENST00000502948 IGLV3-12A0A075B6K2 115 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 GOLGA6L9A6NEM1 432 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MIF4GDA9UHW6 222 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 BHMG1C9JSJ3 638 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CDK2AP1O14519 115 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DSCR3O14972 297 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 KPNA5O15131 536 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PRICKLE3O43900 615 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PHF2O75151 1096 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CNOT3O75175 753 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SUN1O94901 812 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SLCO2B1O94956 709 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CLDN1O95832 211 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CYC1P08574 325 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 RNF224P0DH78 156 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CD9P21926 228 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FDXRP22570 491 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MSNP26038 577 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FOXN2P32314 431 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DCTP40126 519 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MARCKSL1P49006 195 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PER3P56645 1201 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CDH17Q12864 832 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 KLF1Q13351 362 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MRPL49Q13405 166 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 ELOAQ14241 798 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 GRM7Q14831 915 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 NAA25Q14CX7 972 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 TLR1Q15399 786 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 NR6A1Q15406 480 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 ZIC1Q15915 447 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DBN1Q16643 649 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CYP2A13Q16696 494 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM214AQ32MH5 1076 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PTCHD3Q3KNS1 767 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM182AQ5T1J6 154 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CCDC181Q5TID7 509 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 AGAP7PQ5VUJ5 663 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PRAMEF13Q5VWM6 474 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MLIPQ5VWP3 458 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PRMT9Q6P2P2 845 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DARS2Q6PI48 645 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FBXO38Q6PIJ6 1188 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 KCNMB4Q86W47 210 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DCUN1D3Q8IWE4 304 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PIANPQ8IYJ0 282 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CLDN19Q8N6F1 224 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 OR5AR1Q8NGP9 310 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 OR2L8Q8NGY9 312 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC35B2Q8TB61 432 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 PRR7Q8TB68 274 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CCDC110Q8TBZ0 833 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 ELMO1Q92556 727 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms