RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 TRIM54Q9BYV2 358 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 COPS7BQ9H9Q2 264 aaPredicted RBP20.67■□□□□ 0.9
FGFR1-223ENST00000496296 TSR3Q9UJK0 312 aaKnown RBP20.67■□□□□ 0.9
FGFR1-223ENST00000496296 A0A1W2PP55 124 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 EEDO75530 441 aaKnown RBP20.67■□□□□ 0.9
FGFR1-223ENST00000496296 ASGR2P07307 311 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 HSPA13P48723 471 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 DIO3P55073 304 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 TMEM115Q12893 351 aaPredicted RBP20.67■□□□□ 0.9
FGFR1-223ENST00000496296 BNIP2Q12982 314 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 SMAD2Q15796 467 aaKnown RBP20.67■□□□□ 0.9
FGFR1-223ENST00000496296 FBXO48Q5FWF7 155 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 PLEKHS1Q5SXH7 462 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 GOLGA7Q7Z5G4 137 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 PCDHAC1Q9H158 963 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 MUC13Q9H3R2 512 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 AP4S1Q9Y587 144 aa20.67■□□□□ 0.9
FGFR1-223ENST00000496296 CKAP5Q14008 2032 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 COL4A2P08572 1712 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 OR2AG2A6NM03 316 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 NME4O00746 187 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 OR7A17O14581 309 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 ATG13O75143 517 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 OTCP00480 354 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 NPPAP01160 153 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 TCN1P20061 433 aaPredicted RBP20.66■□□□□ 0.9
FGFR1-223ENST00000496296 GTF2H2Q13888 395 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 SMU1Q2TAY7 513 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 VPS26BQ4G0F5 336 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 C6orf136Q5SQH8 315 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 GTF2H2CQ6P1K8 395 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 LETMD1Q6P1Q0 360 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 TTC23LQ6PF05 361 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 Q6ZSR9 355 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 SLC15A3Q8IY34 581 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 OR52B6Q8NGF0 335 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 SCML1Q9UN30 329 aa20.66■□□□□ 0.9
FGFR1-223ENST00000496296 AQP12BA6NM10 295 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 EIF4E1BA6NMX2 242 aaKnown RBP20.65■□□□□ 0.9
FGFR1-223ENST00000496296 ADAM23O75077 832 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 FOLH1Q04609 750 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 HSPA14Q0VDF9 509 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 TRAF3Q13114 568 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 BOP1Q14137 746 aaKnown RBP20.65■□□□□ 0.9
FGFR1-223ENST00000496296 IL23RQ5VWK5 629 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 SULT1C3Q6IMI6 304 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 AQP12AQ8IXF9 295 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 ASZ1Q8WWH4 475 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 FAM3CQ92520 227 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 ELMO1Q92556 727 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 ATP6V1E2Q96A05 226 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 SLCO4A1Q96BD0 722 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 LRRC58Q96CX6 371 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 MKRN2Q9H000 416 aaKnown RBP20.65■□□□□ 0.9
FGFR1-223ENST00000496296 EPHX3Q9H6B9 360 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 NOL11Q9H8H0 719 aaKnown RBP20.65■□□□□ 0.9
FGFR1-223ENST00000496296 FBXL12Q9NXK8 326 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 PCDHA9Q9Y5H5 950 aa20.65■□□□□ 0.9
FGFR1-223ENST00000496296 FAM234BA2RU67 622 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 TAPBPO15533 448 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 SOD1P00441 154 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 UBTFL6P0CB48 400 aaPredicted RBP20.64■□□□□ 0.9
FGFR1-223ENST00000496296 SLC6A2P23975 617 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 TAS2R38P59533 333 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 EMX2Q04743 252 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 ZNF648Q5T619 568 aaPredicted RBP20.64■□□□□ 0.9
FGFR1-223ENST00000496296 LAYNQ6UX15 382 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 DHFR2Q86XF0 187 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 GALNT13Q8IUC8 556 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 CDYL2Q8N8U2 506 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 RASGEF1AQ8N9B8 481 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 Q9H521 79 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 ARMC1Q9NVT9 282 aa20.64■□□□□ 0.9
FGFR1-223ENST00000496296 A0A1W2PQF6 199 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 ASPDHA6ND91 283 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 IGLON5A6NGN9 336 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 SLC22A3O75751 556 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 STAMBPO95630 424 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 KCNK10P57789 538 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 SFSWAPQ12872 951 aaKnown RBP20.64■□□□□ 0.89
FGFR1-223ENST00000496296 GTF2H3Q13889 308 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 TLR1Q15399 786 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 MAP7D1Q3KQU3 841 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 EOGTQ5NDL2 527 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 LCN8Q6JVE9 175 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 PRR23BQ6ZRT6 265 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 OR2T34Q8NGX1 318 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 SKA2Q8WVK7 121 aaPredicted RBP20.64■□□□□ 0.89
FGFR1-223ENST00000496296 ESAMQ96AP7 390 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 TRIM15Q9C019 465 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 CMTM6Q9NX76 183 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 SERGEFQ9UGK8 458 aa20.64■□□□□ 0.89
FGFR1-223ENST00000496296 MBD1Q9UIS9 605 aaPredicted RBP20.64■□□□□ 0.89
FGFR1-223ENST00000496296 LEF1Q9UJU2 399 aaPredicted RBP20.64■□□□□ 0.89
FGFR1-223ENST00000496296 CNOT6Q9ULM6 557 aaKnown RBP20.64■□□□□ 0.89
FGFR1-223ENST00000496296 PABPN1LA6NDY0 278 aaKnown RBP20.63■□□□□ 0.89
FGFR1-223ENST00000496296 IFRD1O00458 451 aaPredicted RBP20.63■□□□□ 0.89
FGFR1-223ENST00000496296 NARSO43776 548 aaKnown RBP20.63■□□□□ 0.89
FGFR1-223ENST00000496296 NUAK1O60285 661 aa20.63■□□□□ 0.89
FGFR1-223ENST00000496296 DNAJA2O60884 412 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms