RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DYTNA2CJ06 578 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MGAT4DA6NG13 374 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ZNF839A8K0R7 811 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 BBIP1A8MTZ0 92 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PSMD12O00232 456 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 UBFD1O14562 309 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 CLGNO14967 610 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PIP5K1BO14986 540 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KMOO15229 486 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 RGS14O43566 566 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MGRN1O60291 552 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 UGDHO60701 494 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MTX2O75431 263 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PSIP1O75475 530 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MATN4O95460 622 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KRT6AP02538 564 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KRT6BP04259 564 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 CA5AP35218 305 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 DRD3P35462 400 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KRT6CP48668 564 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 HSPA7P48741 367 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 NHLH1Q02575 133 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 CUL3Q13618 768 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SNCBQ16143 134 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KIF19Q2TAC6 998 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MMEL1Q495T6 779 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PLK5Q496M5 336 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ATP6AP1LQ52LC2 224 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PMS2CLQ68D20 193 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 OGFOD2Q6N063 350 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 TSSK4Q6SA08 328 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 RPS27LQ71UM5 84 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SYVN1Q86TM6 617 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 LRRTM4Q86VH4 590 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 TREML1Q86YW5 311 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SCUBE1Q8IWY4 988 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SLC22A15Q8IZD6 547 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PELI3Q8N2H9 469 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MIER2Q8N344 545 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 KIF2BQ8N4N8 673 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 FBXO15Q8NCQ5 510 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 OR2T34Q8NGX1 318 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 OR2L2Q8NH16 312 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 CFAP61Q8NHU2 1237 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 CEP76Q8TAP6 659 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 HM13Q8TCT9 377 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 TSPEARQ8WU66 669 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ASB12Q8WXK4 309 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 FBXL8Q96CD0 374 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 MOCOSQ96EN8 888 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 PPP3R2Q96LZ3 170 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 NSUN5Q96P11 429 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SLC25A23Q9BV35 468 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 OR2AG1Q9H205 316 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 RMI1Q9H9A7 625 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ACSS2Q9NR19 701 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 DNAJC11Q9NVH1 559 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 POLG2Q9UHN1 485 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 TSR3Q9UJK0 312 aaKnown RBP10.01□□□□□ -0.81
HDAC3-214ENST00000495485 GMEB2Q9UKD1 530 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ADAMTS6Q9UKP5 1117 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 IKZF3Q9UKT9 509 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 COQ6Q9Y2Z9 468 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 ANKRD12Q6UB98 2062 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 SPTBN4Q9H254 2564 aa10.01□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3DA0A087WVF3 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3IA0A087WXS9 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3EA0A087X179 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3KA0A087X1G2 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 LOC100653049A0A140TA62 436 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 A0A1W2PP55 124 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3FA6NER0 549 aaPredicted RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 IGLON5A6NGN9 336 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 LRRC14BA6NHZ5 514 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TMEM233B4DJY2 109 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3LB9A6J9 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 IFRD1O00458 451 aaPredicted RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 PLRG1O43660 514 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 KDM1AO60341 852 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 RNGTTO60942 597 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 ULK1O75385 1050 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 KRT34O76011 436 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 OR4F21O95013 312 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 CLDN9O95484 217 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 SEMA4FO95754 770 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 RETP07949 1114 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 SNRPB2P08579 225 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 TBC1D3HP0C7X1 549 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 TSPAN8P19075 237 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 CCND1P24385 295 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 AGTR2P50052 363 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 CCR5P51681 352 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 ERVK-8P63133 956 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 FASTKQ14296 549 aaKnown RBP10□□□□□ -0.81
HDAC3-214ENST00000495485 PHKG1Q16816 387 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 IMPG1Q17R60 797 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 AGBL4Q5VU57 503 aa10□□□□□ -0.81
HDAC3-214ENST00000495485 LIPJQ5W064 366 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms