RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 IZUMO3Q5VZ72 239 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CPZQ66K79 652 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 PTRHD1Q6GMV3 140 aaKnown RBP9.27□□□□□ -0.93
MSH5-218ENST00000494646 SYVN1Q86TM6 617 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 TAX1BP1Q86VP1 789 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 OTUD6BQ8N6M0 293 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 TEX19Q8NA77 164 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 FLVCR1-AS1Q8TAF5 88 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 MS4A14Q96JA4 679 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 IL17FQ96PD4 163 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 LATS2Q9NRM7 1088 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 BFARQ9NZS9 450 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 CDYLQ9Y232 598 aa9.27□□□□□ -0.93
MSH5-218ENST00000494646 UTP20O75691 2785 aaKnown RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 A6NL46 340 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 F8W8V4 182 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 PRMT5O14744 637 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 AVILO75366 819 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 GPC4O75487 556 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 RFPL1O75677 317 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 OR2B3O76000 313 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 RECKO95980 971 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 PDGFAP04085 211 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 CAPN1P07384 714 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 RAB40ALP0C0E4 278 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 AOAHP28039 575 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 FMO4P31512 558 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 GRIA3P42263 894 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 MLLT10P55197 1068 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 KLRB1Q12918 225 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SLC9A5Q14940 896 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 LRRC8BQ6P9F7 803 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 DRICH1Q6PGQ1 229 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 ZNF517Q6ZMY9 492 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 ASB18Q6ZVZ8 466 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SYTL1Q8IYJ3 562 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 GPR135Q8IZ08 494 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SLC22A15Q8IZD6 547 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 PRELID2Q8N945 189 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 C19orf47Q8N9M1 422 aaKnown RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 TRIM58Q8NG06 486 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SKA2Q8WVK7 121 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 ASZ1Q8WWH4 475 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 THAP4Q8WY91 577 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 MFSD3Q96ES6 412 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 TCTN2Q96GX1 697 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 LRFN5Q96NI6 719 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 TSSK1BQ9BXA7 367 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 NLNQ9BYT8 704 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SYTL2Q9HCH5 934 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 ACSS2Q9NR19 701 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 TREX1Q9NSU2 369 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 IRAK4Q9NWZ3 460 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 SYBUQ9NX95 663 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 OR6C2Q9NZP2 312 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
MSH5-218ENST00000494646 ANAPC2Q9UJX6 822 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 TCFL5Q9UL49 500 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 PPP2R2CQ9Y2T4 447 aa9.26□□□□□ -0.93
MSH5-218ENST00000494646 A0A0J9YY10 115 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 KRT87PA6NCN2 255 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 ZNF185O15231 689 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 VAPBO95292 243 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 KRT14P02533 472 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 APOA4P06727 396 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 HBQ1P09105 142 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 AGXTP21549 392 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 CD9P21926 228 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 ALAS2P22557 587 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 CASRP41180 1078 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 PTGIRP43119 386 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 GABRA4P48169 554 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 TTPAP49638 278 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 RAB28P51157 221 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 PMS2P54278 862 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 EIF3BP55884 814 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 FOXL2P58012 376 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 GPS1Q13098 491 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 GRB7Q14451 532 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 SF1Q15637 639 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 KYNUQ16719 465 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 CCSMST1Q4G0I0 132 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 DNAJC21Q5F1R6 531 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 AARS2Q5JTZ9 985 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 TCTN3Q6NUS6 607 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 C4orf22Q6V702 233 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 SPNS2Q8IVW8 549 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 APLFQ8IW19 511 aaPredicted RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 MPP5Q8N3R9 675 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 DNAJC22Q8N4W6 341 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 ZBTB2Q8N680 514 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 ZNF655Q8N720 491 aaPredicted RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 LINC01555Q8NAE3 123 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms