RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 UBAP2Q5T6F2 1119 aaKnown RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 ANKRD22Q5VYY1 191 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 LRRC8BQ6P9F7 803 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PPP1R3BQ86XI6 285 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 RASGRP3Q8IV61 690 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 D2HGDHQ8N465 521 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 LCN9Q8WX39 176 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 KIAA1143Q96AT1 154 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PWWP2AQ96N64 755 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SERPINB12Q96P63 405 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 HGH1Q9BTY7 390 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 KIFC1Q9BW19 673 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 TSSK1BQ9BXA7 367 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SRMSQ9H3Y6 488 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
ERCC3-209ENST00000494464 PDE7BQ9NP56 450 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 SAYSD1Q9NPB0 183 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 CHRAC1Q9NRG0 131 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 RARRES3Q9UL19 164 aa12.81□□□□□ -0.36
ERCC3-209ENST00000494464 A0A087WUV0 522 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 LOC101059948A0A1B0GTJ6 334 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 ZNF891A8MT65 544 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 EBLN1P0CF75 366 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 FOLR1P15328 257 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 POLR2CP19387 275 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 ARL4DP49703 201 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 CRADDP78560 199 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 KYNUQ16719 465 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 CRTC2Q53ET0 693 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 TBC1D21Q8IYX1 336 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 OR4E2Q8NGC2 313 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 MED8Q96G25 268 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 PITPNM3Q9BZ71 974 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 C1GALT1Q9NS00 363 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 SYBUQ9NX95 663 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 MARCH4Q9P2E8 410 aaPredicted RBP12.8□□□□□ -0.36
ERCC3-209ENST00000494464 SOX13Q9UN79 622 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 ASF1AQ9Y294 204 aa12.8□□□□□ -0.36
ERCC3-209ENST00000494464 TCRBV7S3A2A0A539 114 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 BTN3A3O00478 584 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 BTN3A1O00481 513 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 PRMT5O14744 637 aaPredicted RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 CD3EAPO15446 510 aaKnown RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 SPAG6O75602 509 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 KIAA0754O94854 1291 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 MT-ND3P03897 115 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 MSL3P1P0C860 447 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 MGAT1P26572 445 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ARNTP27540 789 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 NMBRP28336 390 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ATP5DP30049 168 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 SHMT2P34897 504 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 C19orf57Q0VDD7 668 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 COL9A2Q14055 689 aaPredicted RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LY6DQ14210 128 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 C6orf15Q6UXA7 325 aaPredicted RBP12.79□□□□□ -0.36
ERCC3-209ENST00000494464 AMIGO1Q86WK6 493 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LRRC6Q86X45 466 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 SLC22A15Q8IZD6 547 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 PDIK1LQ8N165 341 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ZNF843Q8N446 348 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 MCUQ8NE86 351 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 OR5AR1Q8NGP9 310 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 OR8K5Q8NH50 307 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 OR5K2Q8NHB8 316 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 CCDC77Q9BR77 488 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 TWSG1Q9GZX9 223 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 SYTL2Q9HCH5 934 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 FGF21Q9NSA1 209 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 FETUBQ9UGM5 382 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 POLG2Q9UHN1 485 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 LNPEPQ9UIQ6 1025 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ICKQ9UPZ9 632 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
ERCC3-209ENST00000494464 ATRXP46100 2492 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 GSAPA4D1B5 854 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 C2orf74A8MZ97 194 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 KDM1AO60341 852 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 GPC4O75487 556 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 TIAF1O95411 115 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 MLNP12872 115 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CDH3P22223 829 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 RPS3P23396 243 aaKnown RBP eCLIP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CCR7P32248 378 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CYP4F2P78329 520 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms