RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CDRT15L2A8MXV6 281 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NPIPB4C9JG80 1138 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 E7ESA3 106 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 QSOX1O00391 747 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 KCNK3O14649 394 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GRID2O43424 1007 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 RNF13O43567 381 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 OPHN1O60890 802 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ATG13O75143 517 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ATP2C2O75185 946 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 USP12O75317 370 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 LEFTY1O75610 366 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 BRI3O95415 125 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GLP2RO95838 553 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SRPRAP08240 638 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 MMP3P08254 477 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PTPRAP18433 802 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 EIF2AK2P19525 551 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 CNR1P21554 472 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PON1P27169 355 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SERPINA4P29622 427 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PKLRP30613 574 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 OR1E1P30953 314 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 HTR7P34969 479 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ACTR1BP42025 376 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ALDH3B2P48448 385 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 CDH15P55291 814 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PPP2CBP62714 309 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PPP2CAP67775 309 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GALK2Q01415 458 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ACSM1Q08AH1 577 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 ATP1A4Q13733 1029 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NFYCQ13952 458 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 EZH2Q15910 746 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 KCNMB1Q16558 191 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SLC18A3Q16572 532 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 BMT2Q1RMZ1 405 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TRIM60Q495X7 471 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM41BQ5BJD5 291 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 COQ5Q5HYK3 327 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 FAM47AQ5JRC9 791 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 KHDC1LQ5JSQ8 128 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TEX30Q5JUR7 227 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 UBAP2Q5T6F2 1119 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TCERG1LQ5VWI1 586 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NKAIN2Q5VXU1 208 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 FAM91A1Q658Y4 838 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SLC9A4Q6AI14 798 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM71Q6P5X7 295 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SERPINA13PQ6UXR4 307 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 RSPO2Q6UXX9 243 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TRPM8Q7Z2W7 1104 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SPRED1Q7Z699 444 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PDZD3Q86UT5 571 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 AACSQ86V21 672 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GPR180Q86V85 440 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PHYKPLQ8IUZ5 450 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PPIL6Q8IXY8 311 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 CENPLQ8N0S6 344 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 METTL25Q8N6Q8 603 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NECAB1Q8N987 351 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 FAM47BQ8NA70 645 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GPRC5AQ8NFJ5 357 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 OR10H4Q8NGA5 316 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 OR56B1Q8NGI3 324 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 OR5D18Q8NGL1 313 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GPX8Q8TED1 209 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PYDC1Q8WXC3 89 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 DNASE1L2Q92874 299 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 FBXW5Q969U6 566 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 MIB2Q96AX9 1013 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PHF21AQ96BD5 680 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 LINGO1Q96FE5 620 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NUDT11Q96G61 164 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TOE1Q96GM8 510 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 RAX2Q96IS3 184 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 MEGF10Q96KG7 1140 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 COQ10AQ96MF6 247 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SIGLEC11Q96RL6 698 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 HSD17B14Q9BPX1 270 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NAT9Q9BTE0 207 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 CDADC1Q9BWV3 514 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SGPP1Q9BX95 441 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 CPEB1Q9BZB8 566 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 XYLT2Q9H1B5 865 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 MMP27Q9H306 513 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 NELFAQ9H3P2 528 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SAV1Q9H4B6 383 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 DPEP3Q9H4B8 488 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 PCIF1Q9H4Z3 704 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TMEM185BQ9H7F4 350 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GEMIN7Q9H840 131 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 SYBUQ9NX95 663 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 GCNT4Q9P109 453 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TMEFF2Q9UIK5 374 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 TCFL5Q9UL49 500 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 WBP11Q9Y2W2 641 aaKnown RBP4.12□□□□□ -1.75
BRCA1-220ENST00000492859 KCTD3Q9Y597 815 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 V9GYQ6 96 aa4.12□□□□□ -1.75
BRCA1-220ENST00000492859 A0A087WV48 116 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms