RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ISM1B1AKI9 464 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 E7EQ34 232 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 DNAJB5O75953 348 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 VAPBO95292 243 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 APOA4P06727 396 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 RAB40ALP0C0E4 278 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 PKLRP30613 574 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 VPS41P49754 854 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 TLE1Q04724 770 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 KCNJ11Q14654 390 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 SLC5A12Q1EHB4 618 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 DEFB110Q30KQ9 67 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 PTCHD3Q3KNS1 767 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 LACTB2Q53H82 288 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-219ENST00000491183 FAM69BQ5VUD6 431 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 ZNF385CQ66K41 422 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-219ENST00000491183 PTRHD1Q6GMV3 140 aaKnown RBP17.37■□□□□ 0.37
HMGN1-219ENST00000491183 SYTL1Q8IYJ3 562 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 DNAJC22Q8N4W6 341 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 ENDOVQ8N8Q3 282 aaKnown RBP17.37■□□□□ 0.37
HMGN1-219ENST00000491183 ADAMTS17Q8TE56 1095 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 THAP4Q8WY91 577 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 SEC14L1Q92503 715 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 MS4A14Q96JA4 679 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 NLNQ9BYT8 704 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 ANAPC2Q9UJX6 822 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 SOX13Q9UN79 622 aa17.37■□□□□ 0.37
HMGN1-219ENST00000491183 FER1L5A0AVI2 2057 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 MED13Q9UHV7 2174 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-219ENST00000491183 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 MKRN2OSH3BPM6 223 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 GOLGA8TH3BQL2 631 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 AVILO75366 819 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 NDUFS3O75489 264 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 RFPL1O75677 317 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 RPS3P23396 243 aaKnown RBP eCLIP17.36■□□□□ 0.371e-8■□□□□ 8.7
HMGN1-219ENST00000491183 MAGEA6P43360 314 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 RAB28P51157 221 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 GPS1Q13098 491 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 KIR2DS3Q14952 304 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 COLEC12Q5KU26 742 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 ANKRD22Q5VYY1 191 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 TCTN3Q6NUS6 607 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 FAM198BQ6UWH4 519 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 UNC5DQ6UXZ4 953 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 CAND1Q86VP6 1230 aaKnown RBP17.36■□□□□ 0.37
HMGN1-219ENST00000491183 MPP5Q8N3R9 675 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 C2orf73Q8N5S3 287 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-219ENST00000491183 BIRC8Q96P09 236 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 IL17FQ96PD4 163 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 EPN3Q9H201 632 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 TCFL5Q9UL49 500 aa17.36■□□□□ 0.37
HMGN1-219ENST00000491183 KDM1AO60341 852 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 OR2B3O76000 313 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 KRT14P02533 472 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 PDGFAP04085 211 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CD9P21926 228 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CASRP41180 1078 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CHAF1BQ13112 559 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CTSL3PQ5NE16 218 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CPZQ66K79 652 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 LRRC6Q86X45 466 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 DCUN1D3Q8IWE4 304 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 GPR135Q8IZ08 494 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 MAGOHBQ96A72 148 aaKnown RBP17.35■□□□□ 0.37
HMGN1-219ENST00000491183 PANX3Q96QZ0 392 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
HMGN1-219ENST00000491183 SLC7A5P2Q9GIP4 190 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 GNPTGQ9UJJ9 305 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 KLHL20Q9Y2M5 609 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 JRKLQ9Y4A0 524 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 NFS1Q9Y697 457 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 TNRC6AQ8NDV7 1962 aaKnown RBP17.35■□□□□ 0.37
HMGN1-219ENST00000491183 CCDC88CQ9P219 2028 aa17.35■□□□□ 0.37
HMGN1-219ENST00000491183 ARGFXA6NJG6 315 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 RPN2P04844 631 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 HBQ1P09105 142 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 CBSLP0DN79 551 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 FMO4P31512 558 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 CBSP35520 551 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 EIF3BP55884 814 aaKnown RBP17.34■□□□□ 0.37
HMGN1-219ENST00000491183 TMED2Q15363 201 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 TYSND1Q2T9J0 566 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 CCSMST1Q4G0I0 132 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 REXO1L1PQ8IX06 675 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 OR2L8Q8NGY9 312 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 LPGAT1Q92604 370 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 N4BP2L2Q92802 583 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-219ENST00000491183 PBKQ96KB5 322 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 SNX7Q9UNH6 387 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 NEU2Q9Y3R4 380 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 MYO18BQ8IUG5 2567 aa17.34■□□□□ 0.37
HMGN1-219ENST00000491183 PCSK5Q92824 1860 aa17.33■□□□□ 0.37
HMGN1-219ENST00000491183 KPNA5O15131 536 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 NRDCO43847 1150 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 PRICKLE3O43900 615 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 TMEM63AO94886 807 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 C1orf105O95561 183 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 MAGP20916 626 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms