RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 RDH14Q9HBH5 336 aa12.08□□□□□ -0.48
COL4A5-206ENST00000489230 PARVBQ9HBI1 364 aa12.08□□□□□ -0.48
COL4A5-206ENST00000489230 GPAMQ9HCL2 828 aa12.08□□□□□ -0.48
COL4A5-206ENST00000489230 SLC17A6Q9P2U8 582 aa12.08□□□□□ -0.48
COL4A5-206ENST00000489230 ZNF180Q9UJW8 692 aa12.08□□□□□ -0.48
COL4A5-206ENST00000489230 ATXN7L1Q9ULK2 861 aaPredicted RBP12.08□□□□□ -0.48
COL4A5-206ENST00000489230 MTO1Q9Y2Z2 717 aaKnown RBP12.08□□□□□ -0.48
COL4A5-206ENST00000489230 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 PIKFYVEQ9Y2I7 2098 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 CCDC187A0A096LP49 1063 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 IGHV5-10-1A0A0J9YXX1 117 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 CCDC189A1A4V9 331 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 RASGRF2O14827 1237 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 FKBP9O95302 570 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 ITGA2BP08514 1039 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 F7P08709 466 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-206ENST00000489230 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-206ENST00000489230 LSSP48449 732 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 TAS2R39P59534 338 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 RAB10P61026 200 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 ACACAQ13085 2346 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SP140Q13342 867 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 ERCC6LQ2NKX8 1250 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 IRGCQ6NXR0 463 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 CYB5D1Q6P9G0 228 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 ZNF574Q6ZN55 896 aaPredicted RBP12.07□□□□□ -0.48
COL4A5-206ENST00000489230 KMT5CQ86Y97 462 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SLITRK4Q8IW52 837 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 AGBL5Q8NDL9 886 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SLC44A1Q8WWI5 657 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 LINGO1Q96FE5 620 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 CCDC138Q96M89 665 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 OLFM1Q99784 485 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 NUDT22Q9BRQ3 303 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 HGH1Q9BTY7 390 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SEMA6CQ9H3T2 930 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 OGFRQ9NZT2 677 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 TLK1Q9UKI8 766 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
COL4A5-206ENST00000489230 ASXL3Q9C0F0 2248 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 CELSR3Q9NYQ7 3312 aa12.07□□□□□ -0.48
COL4A5-206ENST00000489230 EXOC1LA0A1B0GW35 172 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 PIPSLA2A3N6 862 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 POC1B-GALNT4F8VUJ3 575 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 RASSF9O75901 435 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 PIAS1O75925 651 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ENO2P09104 434 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ANKRD34CP0C6C1 535 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 THRAP10827 490 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 POLR2CP19387 275 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ABCG1P45844 678 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ARL4DP49703 201 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 AP1S2P56377 157 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ATP6V0D1P61421 351 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 CFHR1Q03591 330 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 UAP1Q16222 522 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-206ENST00000489230 CACHD1Q5VU97 1274 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ANKS6Q68DC2 871 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 UBE2R2Q712K3 238 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-206ENST00000489230 RAB11FIP2Q7L804 512 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 FBXO39Q8N4B4 442 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 OR2L8Q8NGY9 312 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 HMGCLL1Q8TB92 370 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ATL1Q8WXF7 558 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 MTBPQ96DY7 904 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 TGM7Q96PF1 710 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 PARD6BQ9BYG5 372 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 B3GNT4Q9C0J1 378 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 POLR1BQ9H9Y6 1135 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 ACOT9Q9Y305 439 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 PCDHGA8Q9Y5G5 932 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 NFS1Q9Y697 457 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 LOC400499M0QZD8 3231 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-206ENST00000489230 KNTC1P50748 2209 aa12.06□□□□□ -0.48
COL4A5-206ENST00000489230 A0A087X1B8 175 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 GSAPA4D1B5 854 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 FAM149AA5PLN7 773 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 MYO1CO00159 1063 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 CHRM5P08912 532 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 ZNF37AP17032 561 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 RBMS1P29558 406 aaKnown RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 TYK2P29597 1187 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 PRDX3P30048 256 aaKnown RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 VSNL1P62760 191 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 RTP5Q14D33 572 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-206ENST00000489230 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 SNAP47Q5SQN1 464 aa12.05□□□□□ -0.48
COL4A5-206ENST00000489230 TMTC4Q5T4D3 741 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms