RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PIGNO95427 931 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 IGLV2-11P01706 119 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SERPINB2P05120 415 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SP1P08047 785 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SAGP10523 405 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SCG2P13521 617 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 MSH3P20585 1137 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 ACHEP22303 614 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TAF6P49848 677 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 ALDH3A2P51648 485 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 THOP1P52888 689 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 CDH11P55287 796 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SCN1BQ07699 218 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 KLC1Q07866 573 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TFCP2Q12800 502 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRKAA1Q13131 559 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 VWC2Q2TAL6 325 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC35E4Q6ICL7 350 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRR27Q6MZM9 219 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 CORO6Q6QEF8 472 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 MEX3BQ6ZN04 569 aaKnown RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 DCUN1D3Q8IWE4 304 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF595Q8IYB9 648 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 CRYBG2Q8N1P7 616 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TRIML1Q8N9V2 468 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 KBTBD3Q8NAB2 608 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 GRAPLQ8TC17 118 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TMEM143Q96AN5 459 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SPSB1Q96BD6 273 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 CENPTQ96BT3 561 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 THOC1Q96FV9 657 aaKnown RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 RTP3Q9BQQ7 232 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TRMT61BQ9BVS5 477 aaKnown RBP3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 GPR88Q9GZN0 384 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 VN1R1Q9GZP7 353 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 MMP28Q9H239 520 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 SERINC1Q9NRX5 453 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 OSER1Q9NX31 292 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TBC1D7Q9P0N9 293 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 WDR35Q9P2L0 1181 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZDHHC2Q9UIJ5 367 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 TCF19Q9Y242 345 aa3.49□□□□□ -1.85
HMGB1P36-201ENST00000487709 URADA6NGE7 173 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ANKRD61A6NGH8 418 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 E9PI62 339 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 XPNPEP2O43895 674 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 SYNCRIPO60506 623 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 HSPA4LO95757 839 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ATP5BP06576 529 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PLA2G4BP0C869 781 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PAX1P15863 534 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PTAFRP25105 342 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PSMA3P25788 255 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 CCR10P46092 362 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PPP5CP53041 499 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 LIMK1P53667 647 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PNRC1Q12796 327 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PHKG1Q16816 387 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ODF4Q2M2E3 257 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 HYAL4Q2M3T9 481 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 TCTE1Q5JU00 501 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZNF449Q6P9G9 518 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ENPP7Q6UWV6 458 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PPP1R21Q6ZMI0 780 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 TLK2Q86UE8 772 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 NDUFAF2Q8N183 169 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 STPG4Q8N801 248 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 LRRC8CQ8TDW0 803 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 DHX58Q96C10 678 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZMAT2Q96NC0 199 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PKP4Q99569 1192 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 GTPBP2Q9BX10 602 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 MTMR12Q9C0I1 747 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 FN3KQ9H479 309 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 CDH20Q9HBT6 801 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 SDF2L1Q9HCN8 221 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 XAB2Q9HCS7 855 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 CHST11Q9NPF2 352 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 MBNL1Q9NR56 388 aaKnown RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 PRMT7Q9NVM4 692 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 FLRT3Q9NZU0 649 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 TXNDC16Q9P2K2 825 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 CACNG4Q9UBN1 327 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 RPS6KL1Q9Y6S9 549 aa3.48□□□□□ -1.85
HMGB1P36-201ENST00000487709 TEX13DA0A0J9YY54 714 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ANTXRLA6NF34 631 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 NEMP2A6NFY4 417 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CCDC188H7C350 402 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 TRIM77I1YAP6 450 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 PCDH7O60245 1069 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC22A3O75751 556 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CELF2O95319 508 aaKnown RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 PENKP01210 267 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 EDN1P05305 212 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 IGHV4-38-2P0DP08 117 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ACP2P11117 423 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 IRF2P14316 349 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 LIFP15018 202 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 MARK3P27448 753 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms