RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DVL1P1P54792 670 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 POLR2LP62875 67 aaKnown RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CX3CL1P78423 397 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 MZT1Q08AG7 82 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ILF3Q12906 894 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 FOXL2NBQ6ZUU3 175 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 DNAJB7Q7Z6W7 309 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 TLK2Q86UE8 772 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CFAP206Q8IYR0 622 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 OR8H3Q8N146 312 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ARHGAP24Q8N264 748 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF611Q8N823 705 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 MAB21L3Q8N8X9 362 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 TRIML1Q8N9V2 468 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CCDC107Q8WV48 283 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 DHX58Q96C10 678 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 SCRN2Q96FV2 425 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 OTUB1Q96FW1 271 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF583Q96ND8 569 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CPNE1Q99829 537 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 FERMT1Q9BQL6 677 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 ARRDC1-AS1Q9H2J1 176 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 FZD8Q9H461 694 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 RETREG1Q9H6L5 497 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 GRPEL1Q9HAV7 217 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 Q9N2K0 584 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 SERINC1Q9NRX5 453 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 GTF3C4Q9UKN8 822 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 RNF150Q9ULK6 438 aa3.3□□□□□ -1.88
SNRNP27-204ENST00000487029 A0A087WV48 116 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 TRAV34A0A0B4J273 112 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 FAM170AA1A519 330 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 E9PI62 339 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 SYNCRIPO60506 623 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 RNASEH1O60930 286 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 SP1P08047 785 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CETPP11597 493 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CD22P20273 847 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 PSMA3P25788 255 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 PTPN3P26045 913 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CDC25CP30307 473 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 NR2C2P49116 596 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 BMXP51813 675 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CAPZA1P52907 286 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 PDX1P52945 283 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 MAT1AQ00266 395 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 POU3F1Q03052 451 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CUL3Q13618 768 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF672Q499Z4 452 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 SYT14P1Q58G82 188 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 ELFN2Q5R3F8 820 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 C6orf136Q5SQH8 315 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 WBP2NLQ6ICG8 309 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CAVIN1Q6NZI2 390 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 SHQ1Q6PI26 577 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 C11orf57Q6ZUT1 292 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 ABI3BPQ7Z7G0 1075 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 GLRX5Q86SX6 157 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 KBTBD3Q8NAB2 608 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 OR13J1Q8NGT2 312 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 GOT1L1Q8NHS2 421 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 FGFBP3Q8TAT2 258 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 ZNF473Q8WTR7 871 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CD101Q93033 1021 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 WBP2Q969T9 261 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 NODALQ96S42 347 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 PKP4Q99569 1192 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 TRAF4Q9BUZ4 470 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 THUMPD3Q9BV44 507 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 ZBTB20Q9HC78 741 aaPredicted RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 CHCHD3Q9NX63 227 aaKnown RBP3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 PTTG2Q9NZH5 202 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 TBC1D7Q9P0N9 293 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 LRWD1Q9UFC0 647 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 MTUS1Q9ULD2 1270 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 POMT1Q9Y6A1 747 aa3.29□□□□□ -1.88
SNRNP27-204ENST00000487029 FLT1P17948 1338 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 PCDH11YQ9BZA8 1340 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 HTR3EA5X5Y0 456 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 CLIC2O15247 247 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 AP5Z1O43299 807 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 BUB3O43684 328 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SIX3O95343 332 aaPredicted RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 ACSL3O95573 720 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 IGLV2-11P01706 119 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 INHBAP08476 426 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SMIM18P0DKX4 95 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SAGP10523 405 aaPredicted RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 PDGFRAP16234 1089 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 AMD1P17707 334 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 MSH3P20585 1137 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 AZGP1P25311 298 aaKnown RBP3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 HOXC13P31276 330 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 KRT83P78385 493 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 SCN1BQ07699 218 aa3.28□□□□□ -1.88
SNRNP27-204ENST00000487029 DMPKQ09013 629 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms