RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 PAQR5Q9NXK6 330 aaPredicted RBP5.41□□□□□ -1.54
SF1-217ENST00000486960 WSB2Q9NYS7 404 aaPredicted RBP5.41□□□□□ -1.54
SF1-217ENST00000486960 STAP1Q9ULZ2 295 aa5.41□□□□□ -1.54
SF1-217ENST00000486960 MFHAS1Q9Y4C4 1052 aa5.41□□□□□ -1.54
SF1-217ENST00000486960 ENTPD2Q9Y5L3 495 aa5.41□□□□□ -1.54
SF1-217ENST00000486960 MUC22E2RYF6 1773 aaPredicted RBP5.41□□□□□ -1.54
SF1-217ENST00000486960 MYO5AQ9Y4I1 1855 aaKnown RBP5.41□□□□□ -1.54
SF1-217ENST00000486960 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 PTPRBP23467 1997 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ATRQ13535 2644 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 A0A0D9SFI3 127 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 EDDM13A0A1B0GTR0 161 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 UBA6A0AVT1 1052 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 GOLGA8JA6NMD2 632 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 C12orf71A8MTZ7 269 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TEX22C9J3V5 150 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 H0Y8X5 98 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 GOLGA8TH3BQL2 631 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ZNF701M0R085 212 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 NRG2O14511 850 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 CLIC2O15247 247 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ARHGEF9O43307 516 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SORBS2O94875 1100 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 WISP1O95388 367 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SNAI1O95863 264 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 MBD3O95983 291 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 RLN1P04808 185 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 THBS1P07996 1170 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 GOLGA8HP0CJ92 632 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 STAG3L2P0CL84 134 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ATF2P15336 505 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ADRA2CP18825 462 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 FUT1P19526 365 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 MSR1P21757 451 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ACVR2AP27037 513 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 MSX1P28360 303 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 PRDX5P30044 214 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 HIBADHP31937 336 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 GATA4P43694 442 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 RAP1GAPP47736 663 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 CEBPDP49716 269 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 ARHGDIAP52565 204 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 CLDN8P56748 225 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 KRT76Q01546 638 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TGM3Q08188 693 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 NCBP1Q09161 790 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 RFTN1Q14699 578 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 PDK3Q15120 406 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SF3A2Q15428 464 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 SSX2Q16385 188 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 CSRP2Q16527 193 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 MOGQ16653 247 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 PDK4Q16654 411 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SPANXN2Q5MJ10 180 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 RTP2Q5QGT7 225 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TTC38Q5R3I4 469 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 C6orf136Q5SQH8 315 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SAMD5Q5TGI4 173 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ZNF658Q5TYW1 1059 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 LRRC38Q5VT99 294 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 DCAF12L1Q5VU92 463 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 KCTD11Q693B1 232 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 HIST2H2BCQ6DN03 193 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 KIAA0930Q6ICG6 404 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 ARMC6Q6NXE6 501 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SYCE2Q6PIF2 218 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TMC5Q6UXY8 1006 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 Q6ZVU0 165 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TRMT11Q7Z4G4 463 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 CABP7Q86V35 215 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 NRROSQ86YC3 692 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ARID3BQ8IVW6 561 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 FOXRED2Q8IWF2 684 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 OFCC1Q8IZS5 231 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 TOP6BLQ8N6T0 577 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 RASGEF1AQ8N9B8 481 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 KBTBD3Q8NAB2 608 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 FNDC5Q8NAU1 212 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 GALNT11Q8NCW6 608 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 DNAJB14Q8TBM8 379 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ZNF483Q8TF39 744 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 RNFT2Q96EX2 444 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 KREMEN1Q96MU8 473 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 ZNF558Q96NG5 402 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 INPP4AQ96PE3 977 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 GPA33Q99795 319 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SLC29A1Q99808 456 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 SRSF8Q9BRL6 282 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 WDR83Q9BRX9 315 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 CINPQ9BW66 212 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 JAM3Q9BX67 310 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 GPR87Q9BY21 358 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 PITHD1Q9GZP4 211 aaPredicted RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 DDX47Q9H0S4 455 aaKnown RBP5.4□□□□□ -1.54
SF1-217ENST00000486960 POMKQ9H5K3 350 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 MANSC1Q9H8J5 431 aa5.4□□□□□ -1.54
SF1-217ENST00000486960 LIN7CQ9NUP9 197 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms