RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ZNF891A8MT65 544 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 AGRPO00253 132 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 KRIT1O00522 736 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 E2F3O00716 465 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 APOL1O14791 398 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 BUB1O43683 1085 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 NUDT21O43809 227 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 GRAP2O75791 330 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZMPSTE24O75844 475 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 CPNE6O95741 557 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TROVE2P10155 538 aaKnown RBP eCLIP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZFXP17010 805 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 PIK3CBP42338 1070 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 PRCPP42785 496 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 CPA2P48052 419 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 CXCR3P49682 368 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 LIG3P49916 1009 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 NDUFA8P51970 172 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 DSTNP60981 165 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 SRP54P61011 504 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ACTR1AP61163 376 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 B2MP61769 119 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 RIPK1Q13546 671 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF267Q14586 743 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 NFATC4Q14934 902 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ADIPOQQ15848 244 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 DPYSL2Q16555 572 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 NKG7Q16617 165 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 KLHL40Q2TBA0 621 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 CERCAMQ5T4B2 595 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF658Q5TYW1 1059 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ANKRD40Q6AI12 368 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 DENND5AQ6IQ26 1287 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ENPP7Q6UWV6 458 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 MEX3BQ6ZN04 569 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF771Q7L3S4 317 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 SPATA21Q7Z572 469 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 SPRED1Q7Z699 444 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TFAP2DQ7Z6R9 452 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 LUZP1Q86V48 1076 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 COMTD1Q86VU5 262 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 LSRQ86X29 649 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TP53I13Q8NBR0 393 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 KCTD6Q8NC69 237 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 FAM46DQ8NEK8 389 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 LMO3Q8TAP4 145 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 SPATA20Q8TB22 786 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 GRK7Q8WTQ7 553 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 HTRA1Q92743 480 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TSACCQ96A04 125 aaPredicted RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 INTS12Q96CB8 462 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 C19orf60Q96EN9 201 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 EFHD1Q9BUP0 239 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TM6SF2Q9BZW4 377 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 MBNL1Q9NR56 388 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 MBNL3Q9NUK0 354 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ATAD3AQ9NVI7 634 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 ARHGEF38Q9NXL2 777 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 LRIT1Q9P2V4 623 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 MBD2Q9UBB5 411 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 KLQ9UEF7 1012 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 PSME2Q9UL46 239 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 PCDHGA3Q9Y5H0 932 aa6.7□□□□□ -1.34
HDAC3-209ENST00000486618 TNPO3Q9Y5L0 923 aaKnown RBP6.7□□□□□ -1.34
HDAC3-209ENST00000486618 IGLV3-10A0A075B6K4 115 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 TRAV6A0A075B6T7 132 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 CAPN14A8MX76 684 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 FAM227AF5H4B4 570 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 NDUFS8O00217 210 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 NDUFAB1O14561 156 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF189O75820 626 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ZNF202O95125 648 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 GSRP00390 522 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 UGT2B4P06133 528 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ENO2P09104 434 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 UBTFL6P0CB48 400 aaPredicted RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SUOXP51687 545 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ETF1P62495 437 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 RPP38P78345 283 aaKnown RBP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SLC6A3Q01959 620 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 GNA12Q03113 381 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ELP6Q0PNE2 266 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 FOXO1Q12778 655 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 KLRB1Q12918 225 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 CAMK2DQ13557 499 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 TRA2AQ13595 282 aaKnown RBP eCLIP6.69□□□□□ -1.34
HDAC3-209ENST00000486618 GALNT3Q14435 633 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 C16orf72Q14CZ0 275 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 IRF4Q15306 451 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 SNCBQ16143 134 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 ERCC6LQ2NKX8 1250 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 MYLK3Q32MK0 819 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 C14orf28Q4W4Y0 310 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 OR7E24Q6IFN5 339 aa6.69□□□□□ -1.34
HDAC3-209ENST00000486618 OGFOD2Q6N063 350 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms