RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	DANCR	P0C864	163 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	FGF3	P11487	239 aa	Predicted RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SOAT1	P35610	550 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PGGT1B	P53609	377 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	EEF1A1	P68104	462 aa	Known RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PRKCZ	Q05513	592 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PPAT	Q06203	517 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	GPS2	Q13227	327 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	UBE2V1	Q13404	147 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	HNF4G	Q14541	408 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	HLF	Q16534	295 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	CALCRL	Q16602	461 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	KRTCAP3	Q53RY4	240 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	EEF1A1P5	Q5VTE0	462 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	TRNP1	Q6NT89	227 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	TEX38	Q6PEX7	206 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PPP1R21	Q6ZMI0	780 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	ZBTB49	Q6ZSB9	765 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PLEKHM3	Q6ZWE6	761 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SPATA19	Q7Z5L4	167 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	DZIP1	Q86YF9	867 aa	Known RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	C10orf53	Q8N6V4	93 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF611	Q8N823	705 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	KCNE4	Q8WWG9	221 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	EXT2	Q93063	718 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	URB1-AS1	Q96HZ7	61 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	LINC00615	Q96LM1	132 aa	Predicted RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SFXN2	Q96NB2	322 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF558	Q96NG5	402 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SLC22A12	Q96S37	553 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	MTERF1	Q99551	399 aa	Known RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	ABHD6	Q9BV23	337 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	VPS18	Q9P253	973 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	TINAG	Q9UJW2	476 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	CPSF3	Q9UKF6	684 aa	Known RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	LIPT1	Q9Y234	373 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	AMDHD2	Q9Y303	409 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	YIPF1	Q9Y548	306 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	LAMC1	P11047	1609 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	HFM1	A2PYH4	1435 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SPATA31E1	Q6ZUB1	1445 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	ERBIN	Q96RT1	1412 aa		3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	SPTBN5	Q9NRC6	3674 aa	Known RBP	3.76	□□□□□ -1.81
VPS8-223	ENST00000485024	PTPRC	P08575	1304 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ANKUB1	A6NFN9	424 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OR6C76	A6NM76	312 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	BECN2	A8MW95	431 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024		J3KR12	359 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	KCNJ13	O60928	360 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF432	O94892	652 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	SLCO2B1	O94956	709 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	MOCS3	O95396	460 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GLUD1	P00367	558 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	LDLR	P01130	860 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	HOXC6	P09630	235 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OR2T7	P0C7T2	308 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	IGHV4-30-4	P0DP06	118 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	MYL6B	P14649	208 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	PDGFRA	P16234	1089 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	DNASE1	P24855	282 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	TLX1	P31314	330 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GLUD2	P49448	558 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	PLA2G7	Q13093	441 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	TUBB2A	Q13885	445 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	E2F5	Q15329	346 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OASL	Q15646	514 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	UGCG	Q16739	394 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	VWC2	Q2TAL6	325 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	LRIT3	Q3SXY7	679 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	TMEM35A	Q53FP2	167 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GCNT6	Q5T4J0	391 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	RNASEH2B	Q5TBB1	312 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	WDR73	Q6P4I2	378 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF449	Q6P9G9	518 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	IYD	Q6PHW0	289 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	SUSD1	Q6UWL2	747 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	MAP7D3	Q8IWC1	876 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	FOXRED2	Q8IWF2	684 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	CHERP	Q8IWX8	916 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	C1orf52	Q8N6N3	182 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ATAD1	Q8NBU5	361 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GRK7	Q8WTQ7	553 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	SPSB1	Q96BD6	273 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	PRMT6	Q96LA8	375 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	FAM81B	Q96LP2	452 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GFI1	Q99684	422 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	CMKLR1	Q99788	373 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	GPATCH1	Q9BRR8	931 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	INPP5K	Q9BT40	448 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	TUBB2B	Q9BVA1	445 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ST6GALNAC4	Q9H4F1	302 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	PRMT7	Q9NVM4	692 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	CDH7	Q9ULB5	785 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	SNX9	Q9Y5X1	595 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	SNX5	Q9Y5X3	404 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	KIDINS220	Q9ULH0	1771 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OVOS2	A0A0G2JMS6	1433 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OVOS2	A0A0J9YW53	1432 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	OVOS2	Q6IE36	1432 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	RRBP1	Q9P2E9	1410 aa	Known RBP	3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms