RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RPS18P62269 152 aaKnown RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CAV1Q03135 178 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CALCOCO2Q13137 446 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 THOC5Q13769 683 aaKnown RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 TMED2Q15363 201 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 HIF1AQ16665 826 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 LONRF1Q17RB8 773 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 SPANXN3Q5MJ09 141 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 NEPROQ6NW34 567 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 FAM199XQ6PEV8 388 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 FAM83HQ6ZRV2 1179 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 GALNT7Q86SF2 657 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CILP2Q8IUL8 1156 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 C17orf53Q8N3J3 647 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 CLDN19Q8N6F1 224 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 MNS1Q8NEH6 495 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 RSC1A1Q92681 617 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ZNF669Q96BR6 464 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ZDHHC12Q96GR4 267 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 FAM167BQ9BTA0 163 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 SLC25A23Q9BV35 468 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 P2RY12Q9H244 342 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 OR52A5Q9H2C5 316 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ACTL8Q9H568 366 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 KIR3DX1Q9H7L2 352 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 PDE7BQ9NP56 450 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 ACSS2Q9NR19 701 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 LUZP4Q9P127 313 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 KLHL42Q9P2K6 505 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 UTP11Q9Y3A2 253 aaKnown RBP9.71□□□□□ -0.86
CPSF4-213ENST00000484112 MAD1L1Q9Y6D9 718 aa9.71□□□□□ -0.86
CPSF4-213ENST00000484112 SLC5A10A0PJK1 596 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 OR52A4PA6NMU1 304 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 ENO4A6NNW6 628 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 EIF3HO15372 352 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 TIAF1O95411 115 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 RPN2P04844 631 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 APOA4P06727 396 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PRSS56P0CW18 603 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 COL8A1P27658 744 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PBLDP30039 288 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 ATP5DP30049 168 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 ITGA8P53708 1063 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 RPS15P62841 145 aaKnown RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 GPR18Q14330 331 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 SEMA3AQ14563 771 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 KCNAB1Q14722 419 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 EIF2S3LQ2VIR3 472 aaKnown RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 SYTL3Q4VX76 610 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 CPZQ66K79 652 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PTRHD1Q6GMV3 140 aaKnown RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PWWP2BQ6NUJ5 590 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 CYB5D1Q6P9G0 228 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 KIAA0408Q6ZU52 694 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 OTUD6BQ8N6M0 293 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 ACVR1CQ8NER5 493 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 KIF18AQ8NI77 898 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 ELMO1Q92556 727 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 LPGAT1Q92604 370 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 C12orf66Q96MD2 445 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 INSM2Q96T92 566 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 CD180Q99467 661 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 FAM129AQ9BZQ8 928 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 WWP1Q9H0M0 922 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 TFB2MQ9H5Q4 396 aaKnown RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 AKIRIN1Q9H9L7 192 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 IMP3Q9NV31 184 aaKnown RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 MARCH4Q9P2E8 410 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-213ENST00000484112 POLG2Q9UHN1 485 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 RARRES3Q9UL19 164 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 PCDHGA6Q9Y5G7 932 aa9.7□□□□□ -0.86
CPSF4-213ENST00000484112 NBPF19A0A087WUL8 3843 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 UBA6A0AVT1 1052 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 C21orf140B9A014 251 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 E7ESA3 106 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 OR1I1O60431 355 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 GPC4O75487 556 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 URI1O94763 535 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 SLCO2B1O94956 709 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 FOLR1P15328 257 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 AOAHP28039 575 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 ARL4DP49703 201 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TERF1P54274 439 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 PPP1CAP62136 330 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 MRPL49Q13405 166 aaKnown RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TUBB3Q13509 450 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 BOP1Q14137 746 aaKnown RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 KRT33BQ14525 404 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 CRYMQ14894 314 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 INPP5JQ15735 1006 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 UGT8Q16880 541 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 PRR30Q53SZ7 412 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms